Mp2g16240



Description

Annotation

Database ID Description
Pfam PF08263 Leucine rich repeat N-terminal domain
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Pfam PF07714 Protein tyrosine and serine/threonine kinase
FunFam G3DSA:3.80.10.10:FF:000400 Nuclear pore complex protein NUP107
ProSiteProfiles PS50011 Protein kinase domain profile.
PANTHER PTHR48055 LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF52058 L domain-like
Pfam PF13855 Leucine rich repeat
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:3.30.200.20:FF:000039 receptor-like protein kinase FERONIA
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0472 Leucine-rich repeat protein; C-term missing; [S]
MapolyID Mapoly0122s0040 -
GO GO:0005524 ATP binding
GO GO:0005515 protein binding
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RLCK-IXa Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16240.1 chr2:18524664..18531105 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g16240 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g16240 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.