Mp2g17960



Description

Annotation

Database ID Description
Coils Coil Coil
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
PANTHER PTHR47989 OS01G0750732 PROTEIN
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF19160 SPARK
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSiteProfiles PS50011 Protein kinase domain profile.
SMART SM00220 serkin_6
CDD cd14066 STKc_IRAK
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
FunFam G3DSA:1.10.510.10:FF:000287 probable LRR receptor-like serine/threonine-protein kinase RKF3
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Pfam PF00069 Protein kinase domain
CDD cd12087 TM_EGFR-like
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0094s0064 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RKF3a Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g17960.1 chr2:20861301..20865572 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g17960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g17960 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.