Mp2g20220
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF53901 | Thiolase-like |
| FunFam | G3DSA:3.40.47.10:FF:000028 | 3-ketoacyl-CoA synthase |
| PIRSF | PIRSF036417 | Very_long_ch_3-ktacl-CoA_syn |
| Pfam | PF08541 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal |
| Gene3D | G3DSA:3.40.47.10 | - |
| PANTHER | PTHR31561 | 3-KETOACYL-COA SYNTHASE |
| Pfam | PF08392 | FAE1/Type III polyketide synthase-like protein |
| CDD | cd00831 | CHS_like |
| KEGG | K15397 | 3-ketoacyl-CoA synthase [EC:2.3.1.199] |
| MapolyID | Mapoly0055s0027 | - |
| GO | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups |
| GO | GO:0016746 | acyltransferase activity |
| GO | GO:0006633 | fatty acid biosynthetic process |
| GO | GO:0016020 | membrane |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpFAE3 | β-ketoacyl-CoA synthase; fatty acid elongase | Published | |
| MpKCS2 | Secondary metabolism enzyme, Cuticle related protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
beta-ketoacyl-CoA synthase (KCS) gene; overexpression in Marchantia and yeast showed MpFAE3 preferentially elongates palmitic acid (16:0) to stearic acid (18:0), with further elongation to 20:0/22:0.
1 core 1 peripheral
Kajikawa M, Yamato KT, Kanamaru H, Sakuradani E, Shimizu S, Fukuzawa H, Sakai Y, Ohyama K. (2003)
· Biosci Biotechnol Biochem research experimental subject
beta-ketoacyl-CoA synthase (KCS) gene; overexpression in Marchantia and yeast showed MpFAE3 preferentially elongates palmitic acid (16:0) to stearic acid (18:0), with further elongation to 20:0/22:0.
Monte, I., et al. (2018)
· Nature Chemical Biology research citation background
Beta-ketoacyl-CoA synthase; cited reference.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g20220 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g20220.1 ATCGTACCCC CATACGGCTG CTCTCTTCAC GCTGTAACAC TGTCGCATGC ATTATGGTCC ACAGTGAGAC GTAGAAGCAG CAGCATCAGG AGGCCCCGAC GGACTCACTC AGCCTTGGGA ACGTCGGACA CGGGGGAGGC TACTGCGCCA CGCCGCGAGT ACAGTAGGCA AGGCTAGGCA AGGCAGGGCA GGGCCGGGCC TTCTTCCAAT CTATTCCTTG ACCCACGAGC CGGGCTGCGC TGCAGTTCGC CATTGGCGAG CGGCCTGAGC TGGACTGCGG GTGACAGTCG GATCTCGGGG CCCTCCTCCG TTCGCAGTTG GCACTTGCCA GCCGAGGCGA GGTCGTGCGC TGCGCGTCGG CCGTGGTCGA GTTTCTTCAG TCCCGAGTGT GAACACATCC TTCGACGGCA TACCTGTCTG CCTGGCCGCG AGCGCATCCC AGCTGCTGCC TGCGGGAGCC GCTAGCACTG TTTGCCATCA GCGGATCGCG ATTCGCGATT GTGGGCTTCG GCGTCGCTGT GCTGCGATCA GCAGGAGAAC GTGAGGACGA GGCAGAGTCC AGGTTGGTGA GCGCATTGAC AGTCTTCATT ATTCGGAGTC AGACTAGGGC ACATTGCGTT CCACGATCGC GGTGCGCTGA GGTCGTCATC GTCGCACTCG CTTGCGCGGA GCTCCGAGTG CAGCCACTGC TGCCCCTTCC CTTCCGAAGC AGTGAGCTGC ACCTCGTTCG TCCCGTGCTG TCGGAGCGAT TCTGGTCTTA GGATCTCGAG CGATCTCCCC TCCCAGTGCC GAATGCCTCC GCGCTGCGCT CTTGCTTTTG TCGCGCCTGC TCCGCCCGCC CTCTCTTTCG CCTTTCTGGC CCCGGCGCCA GCGAGTCTTG GGTAGCGCGC AGGGGGCCTC GAATCCCCGC TTTGCTCCCT CGGAGGGAGA GCTGCGCCTA ACGGGCGACA GCGTACGCGG GCAACGGACA GTTGGGCGGG GGATCTTCCG GCGCACCGCA GACACGCCGC GACATTGATC GGCGTCGACG AGGAGCAGGA TTTCGTTCGG GCAATTCGTT CGCATTCCGC TCAATTTGTT CGAGGAGGGC CGACGATCTT GCGAGGTCCC GATCATGGAT TCTCGAGCTC AGAATCGGGA CGGAGGCGAG GACGTGAAAC AGGAGCTGCT CTCGGCTGGG GACGATGGCA AGGTGCCGTG CCCCACCGTG GCAATTGGAA TCCGACAGCG GCTCCCGGAT TTTCTGCAGT CGGTGAACAT GAAGTACGTG AAGCTGGGGT ACCACTACCT GATCACGCAT GCCATGTTCC TGCTCACGCT GCCCGCATTT TTCCTGGTGG CCGCGGAAAT AGGTCGATTG GGCCACGAGA GGATCTACCG CGAGCTCTGG ACGCACTTGC ATCTCAATCT GGTGAGCATT ATGGCCTGCT CGAGCGCGCT CGTGGCCGGG GCCACCCTCT ACTTCATGTC TCGTCCGCGG CCCGTGTATC TGGTGGAGTT CGCCTGTTAC CGCCCGGACG AGAGGCTGAA AGTGAGCAAG GACTTCTTTC TGGACATGTC GAGACGCACG GGCCTCTTCT CGTCTTCCAG CATGGACTTC CAGACGAAGA TTACGCAGCG CTCGGGTTTA GGTGACGAGA CTTACCTACC ACCGGCCATC CTGGCCTCGC CGCCCAATCC CTGCATGCGC GAGGCTCGCG AGGAGGCGGC GATGGTCATG TTCGGAGCTC TGGATGAGCT CTTCGAGCAA ACCGGTGTGA AGCCCAAGGA GATTGGAGTT CTGGTCGTCA ACTGCAGCTT GTTCAATCCG ACCCCGTCGA TGTCGGCGAT GATCGTCAAT CACTACCACA TGCGCGGGAA CATCAAGTCT TTGAACCTGG GCGGAATGGG GTGCAGCGCG GGCTTGATAT CGATCGACCT GGCCCGGGAC CTTCTGCAGG TCCATGGCAA CACCTACGCC GTCGTCGTGA GCACGGAGAA CATCACCCTC AATTGGTACT TCGGCGACGA TCGCAGCAAG CTCATGTCCA ACTGCATTTT CCGAATGGGG GGAGCCGCAG TGCTGCTCTC GAACAAGAGG CGCGAGAGGC GCAGGGCCAA ATATGAGCTC CTGCACACCG TGCGCACCCA CAAGGGCGCC GATGACAAGT GCTTCCGCTG CGTGTACCAG GAGGAGGATT CGACCGGCAG CCTCGGCGTG TCTCTGTCCC GGGAGCTCAT GGCTGTGGCC GGAAACGCGC TGAAAGCCAA CATCACCACT CTCGGGCCTC TGGTGCTTCC ACTGTCGGAG CAGATTCTGT TTTTCGCATC TCTGGTAGCC AGGAAGTTCC TCAATATGAA GATGAAACCT TACATTCCTG ATTTCAAGCT GGCATTCGAG CACTTCTGCA TACATGCCGG GGGCCGAGCG GTGCTGGATG AGCTGGAGAA GAACCTGGAT CTCACAGAGT GGCACATGGA GCCCTCCCGA ATGACTCTCT ACAGGTTCGG AAACACGTCC AGCAGCTCTC TGTGGTACGA GCTGGCCTAC ACGGAGGCTC AGGGCAGAGT GAAGCGTGGG GACCGGCTCT GGCAGATTGC CTTCGGGTCA GGGTTTAAGT GTAACAGCGC TGTGTGGAGG GCTCTCAGAA CTGTCAAACC ACCCGTCAAC AATGCATGGT CCGATGTGAT CGACAGATTT CCGGTCAAAC TTCCTCAATT CTGAGATTCA GAGCAAGAAC CGAGTCCTGG CTTCGTCGTC ATCGCCATCG TCGTCATTTC ATACATCACC GAATCGATTT CTCTGAATCG TACACGGCGG CCCGCGCAGG GAATCCGATA CTCTGAATTA GGTGACACTC TGTTCTTGGA TGTTTACGGA ATCCTCCGAG GATTTCCTCG TCAAATGCTG TATTGCGATG ACATGCCTCG GGCGTGGAGG AAGGGGAAAG CAGTGTGAGC TTCGTACATC CATCTACAAC GCGACGGACA GCCGCGTATC TTATTTCATA CTGGACACGA GAGAATGGAT GTGGTGAAGT GTTCACCACA TCCATTCCCG CTGTCCATCT TCAATCCTGC TCACTTTAGA TGTCATTCAT GAATAAGTGA ATCTCTCTGT ACTATATTCG AGTCTGAACC GAAGGTTGAA AGACTCCAAT GAGCACACAC ACGATCGTAC GCACCGAATC GCCGTCTTAT AGCGGTGCTA GGCTGCTATG CTGGTTACCA TTAGCTTCAA ATCGTGAAAT CGGTTATGGT AGTGCACGTC CGGAGGATAG TTGTCCTATG GCTAGTTAGT AGTCGCCTGC TCGCCTAGTG CCGTGCCCCG CTCAAGTGAT TTGCAACTTT TGTCCCAATT CCAAGTTTGG ATCATGTTTA CATACACATT CTTAATTTGA ATCGAGAGTA TCAAATTATG CC |
mRNA UTR + CDS |
| >Mp2g20220.1 ATCGTACCCC CATACGGCTG CTCTCTTCAC GCTGTAACAC TGTCGCATGC ATTATGGTCC ACAGTGAGAC GTAGAAGCAG CAGCATCAGG AGGCCCCGAC GGACTCACTC AGCCTTGGGA ACGTCGGACA CGGGGGAGGC TACTGCGCCA CGCCGCGAGT ACAGTAGGCA AGGCTAGGCA AGGCAGGGCA GGGCCGGGCC TTCTTCCAAT CTATTCCTTG ACCCACGAGC CGGGCTGCGC TGCAGTTCGC CATTGGCGAG CGGCCTGAGC TGGACTGCGG GTGACAGTCG GATCTCGGGG CCCTCCTCCG TTCGCAGTTG GCACTTGCCA GCCGAGGCGA GGTCGTGCGC TGCGCGTCGG CCGTGGTCGA GTTTCTTCAG TCCCGAGTGT GAACACATCC TTCGACGGCA TACCTGTCTG CCTGGCCGCG AGCGCATCCC AGCTGCTGCC TGCGGGAGCC GCTAGCACTG TTTGCCATCA GCGGATCGCG ATTCGCGATT GTGGGCTTCG GCGTCGCTGT GCTGCGATCA GCAGGAGAAC GTGAGGACGA GGCAGAGTCC AGGTTGGTGA GCGCATTGAC AGTCTTCATT ATTCGGAGTC AGACTAGGGC ACATTGCGTT CCACGATCGC GGTGCGCTGA GGTCGTCATC GTCGCACTCG CTTGCGCGGA GCTCCGAGTG CAGCCACTGC TGCCCCTTCC CTTCCGAAGC AGTGAGCTGC ACCTCGTTCG TCCCGTGCTG TCGGAGCGAT TCTGGTCTTA GGATCTCGAG CGATCTCCCC TCCCAGTGCC GAATGCCTCC GCGCTGCGCT CTTGCTTTTG TCGCGCCTGC TCCGCCCGCC CTCTCTTTCG CCTTTCTGGC CCCGGCGCCA GCGAGTCTTG GGTAGCGCGC AGGGGGCCTC GAATCCCCGC TTTGCTCCCT CGGAGGGAGA GCTGCGCCTA ACGGGCGACA GCGTACGCGG GCAACGGACA GTTGGGCGGG GGATCTTCCG GCGCACCGCA GACACGCCGC GACATTGATC GGCGTCGACG AGGAGCAGGA TTTCGTTCGG GCAATTCGTT CGCATTCCGC TCAATTTGTT CGAGGAGGGC CGACGATCTT GCGAGGTCCC GATCATGGAT TCTCGAGCTC AGAATCGGGA CGGAGGCGAG GACGTGAAAC AGGAGCTGCT CTCGGCTGGG GACGATGGCA AGGTGCCGTG CCCCACCGTG GCAATTGGAA TCCGACAGCG GCTCCCGGAT TTTCTGCAGT CGGTGAACAT GAAGTACGTG AAGCTGGGGT ACCACTACCT GATCACGCAT GCCATGTTCC TGCTCACGCT GCCCGCATTT TTCCTGGTGG CCGCGGAAAT AGGTCGATTG GGCCACGAGA GGATCTACCG CGAGCTCTGG ACGCACTTGC ATCTCAATCT GGTGAGCATT ATGGCCTGCT CGAGCGCGCT CGTGGCCGGG GCCACCCTCT ACTTCATGTC TCGTCCGCGG CCCGTGTATC TGGTGGAGTT CGCCTGTTAC CGCCCGGACG AGAGGCTGAA AGTGAGCAAG GACTTCTTTC TGGACATGTC GAGACGCACG GGCCTCTTCT CGTCTTCCAG CATGGACTTC CAGACGAAGA TTACGCAGCG CTCGGGTTTA GGTGACGAGA CTTACCTACC ACCGGCCATC CTGGCCTCGC CGCCCAATCC CTGCATGCGC GAGGCTCGCG AGGAGGCGGC GATGGTCATG TTCGGAGCTC TGGATGAGCT CTTCGAGCAA ACCGGTGTGA AGCCCAAGGA GATTGGAGTT CTGGTCGTCA ACTGCAGCTT GTTCAATCCG ACCCCGTCGA TGTCGGCGAT GATCGTCAAT CACTACCACA TGCGCGGGAA CATCAAGTCT TTGAACCTGG GCGGAATGGG GTGCAGCGCG GGCTTGATAT CGATCGACCT GGCCCGGGAC CTTCTGCAGG TCCATGGCAA CACCTACGCC GTCGTCGTGA GCACGGAGAA CATCACCCTC AATTGGTACT TCGGCGACGA TCGCAGCAAG CTCATGTCCA ACTGCATTTT CCGAATGGGG GGAGCCGCAG TGCTGCTCTC GAACAAGAGG CGCGAGAGGC GCAGGGCCAA ATATGAGCTC CTGCACACCG TGCGCACCCA CAAGGGCGCC GATGACAAGT GCTTCCGCTG CGTGTACCAG GAGGAGGATT CGACCGGCAG CCTCGGCGTG TCTCTGTCCC GGGAGCTCAT GGCTGTGGCC GGAAACGCGC TGAAAGCCAA CATCACCACT CTCGGGCCTC TGGTGCTTCC ACTGTCGGAG CAGATTCTGT TTTTCGCATC TCTGGTAGCC AGGAAGTTCC TCAATATGAA GATGAAACCT TACATTCCTG ATTTCAAGCT GGCATTCGAG CACTTCTGCA TACATGCCGG GGGCCGAGCG GTGCTGGATG AGCTGGAGAA GAACCTGGAT CTCACAGAGT GGCACATGGA GCCCTCCCGA ATGACTCTCT ACAGGTTCGG AAACACGTCC AGCAGCTCTC TGTGGTACGA GCTGGCCTAC ACGGAGGCTC AGGGCAGAGT GAAGCGTGGG GACCGGCTCT GGCAGATTGC CTTCGGGTCA GGGTTTAAGT GTAACAGCGC TGTGTGGAGG GCTCTCAGAA CTGTCAAACC ACCCGTCAAC AATGCATGGT CCGATGTGAT CGACAGATTT CCGGTCAAAC TTCCTCAATT CTGAGATTCA GAGCAAGAAC CGAGTCCTGG CTTCGTCGTC ATCGCCATCG TCGTCATTTC ATACATCACC GAATCGATTT CTCTGAATCG TACACGGCGG CCCGCGCAGG GAATCCGATA CTCTGAATTA GGTGACACTC TGTTCTTGGA TGTTTACGGA ATCCTCCGAG GATTTCCTCG TCAAATGCTG TATTGCGATG ACATGCCTCG GGCGTGGAGG AAGGGGAAAG CAGTGTGAGC TTCGTACATC CATCTACAAC GCGACGGACA GCCGCGTATC TTATTTCATA CTGGACACGA GAGAATGGAT GTGGTGAAGT GTTCACCACA TCCATTCCCG CTGTCCATCT TCAATCCTGC TCACTTTAGA TGTCATTCAT GAATAAGTGA ATCTCTCTGT ACTATATTCG AGTCTGAACC GAAGGTTGAA AGACTCCAAT GAGCACACAC ACGATCGTAC GCACCGAATC GCCGTCTTAT AGCGGTGCTA GGCTGCTATG CTGGTTACCA TTAGCTTCAA ATCGTGAAAT CGGTTATGGT AGTGCACGTC CGGAGGATAG TTGTCCTATG GCTAGTTAGT AGTCGCCTGC TCGCCTAGTG CCGTGCCCCG CTCAAGTGAT TTGCAACTTT TGTCCCAATT CCAAGTTTGG ATCATGTTTA CATACACATT CTTAATTTGA ATCGAGAGTA TCAAATTATG CC |
CDS |
| >Mp2g20220.1 ATGGATTCTC GAGCTCAGAA TCGGGACGGA GGCGAGGACG TGAAACAGGA GCTGCTCTCG GCTGGGGACG ATGGCAAGGT GCCGTGCCCC ACCGTGGCAA TTGGAATCCG ACAGCGGCTC CCGGATTTTC TGCAGTCGGT GAACATGAAG TACGTGAAGC TGGGGTACCA CTACCTGATC ACGCATGCCA TGTTCCTGCT CACGCTGCCC GCATTTTTCC TGGTGGCCGC GGAAATAGGT CGATTGGGCC ACGAGAGGAT CTACCGCGAG CTCTGGACGC ACTTGCATCT CAATCTGGTG AGCATTATGG CCTGCTCGAG CGCGCTCGTG GCCGGGGCCA CCCTCTACTT CATGTCTCGT CCGCGGCCCG TGTATCTGGT GGAGTTCGCC TGTTACCGCC CGGACGAGAG GCTGAAAGTG AGCAAGGACT TCTTTCTGGA CATGTCGAGA CGCACGGGCC TCTTCTCGTC TTCCAGCATG GACTTCCAGA CGAAGATTAC GCAGCGCTCG GGTTTAGGTG ACGAGACTTA CCTACCACCG GCCATCCTGG CCTCGCCGCC CAATCCCTGC ATGCGCGAGG CTCGCGAGGA GGCGGCGATG GTCATGTTCG GAGCTCTGGA TGAGCTCTTC GAGCAAACCG GTGTGAAGCC CAAGGAGATT GGAGTTCTGG TCGTCAACTG CAGCTTGTTC AATCCGACCC CGTCGATGTC GGCGATGATC GTCAATCACT ACCACATGCG CGGGAACATC AAGTCTTTGA ACCTGGGCGG AATGGGGTGC AGCGCGGGCT TGATATCGAT CGACCTGGCC CGGGACCTTC TGCAGGTCCA TGGCAACACC TACGCCGTCG TCGTGAGCAC GGAGAACATC ACCCTCAATT GGTACTTCGG CGACGATCGC AGCAAGCTCA TGTCCAACTG CATTTTCCGA ATGGGGGGAG CCGCAGTGCT GCTCTCGAAC AAGAGGCGCG AGAGGCGCAG GGCCAAATAT GAGCTCCTGC ACACCGTGCG CACCCACAAG GGCGCCGATG ACAAGTGCTT CCGCTGCGTG TACCAGGAGG AGGATTCGAC CGGCAGCCTC GGCGTGTCTC TGTCCCGGGA GCTCATGGCT GTGGCCGGAA ACGCGCTGAA AGCCAACATC ACCACTCTCG GGCCTCTGGT GCTTCCACTG TCGGAGCAGA TTCTGTTTTT CGCATCTCTG GTAGCCAGGA AGTTCCTCAA TATGAAGATG AAACCTTACA TTCCTGATTT CAAGCTGGCA TTCGAGCACT TCTGCATACA TGCCGGGGGC CGAGCGGTGC TGGATGAGCT GGAGAAGAAC CTGGATCTCA CAGAGTGGCA CATGGAGCCC TCCCGAATGA CTCTCTACAG GTTCGGAAAC ACGTCCAGCA GCTCTCTGTG GTACGAGCTG GCCTACACGG AGGCTCAGGG CAGAGTGAAG CGTGGGGACC GGCTCTGGCA GATTGCCTTC GGGTCAGGGT TTAAGTGTAA CAGCGCTGTG TGGAGGGCTC TCAGAACTGT CAAACCACCC GTCAACAATG CATGGTCCGA TGTGATCGAC AGATTTCCGG TCAAACTTCC TCAATTCTGA |
Protein |
| >Mp2g20220.1 MDSRAQNRDG GEDVKQELLS AGDDGKVPCP TVAIGIRQRL PDFLQSVNMK YVKLGYHYLI THAMFLLTLP AFFLVAAEIG RLGHERIYRE LWTHLHLNLV SIMACSSALV AGATLYFMSR PRPVYLVEFA CYRPDERLKV SKDFFLDMSR RTGLFSSSSM DFQTKITQRS GLGDETYLPP AILASPPNPC MREAREEAAM VMFGALDELF EQTGVKPKEI GVLVVNCSLF NPTPSMSAMI VNHYHMRGNI KSLNLGGMGC SAGLISIDLA RDLLQVHGNT YAVVVSTENI TLNWYFGDDR SKLMSNCIFR MGGAAVLLSN KRRERRRAKY ELLHTVRTHK GADDKCFRCV YQEEDSTGSL GVSLSRELMA VAGNALKANI TTLGPLVLPL SEQILFFASL VARKFLNMKM KPYIPDFKLA FEHFCIHAGG RAVLDELEKN LDLTEWHMEP SRMTLYRFGN TSSSSLWYEL AYTEAQGRVK RGDRLWQIAF GSGFKCNSAV WRALRTVKPP VNNAWSDVID RFPVKLPQF |