Mp2g23430



Description

Annotation

Database ID Description
KOG KOG1633 F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains; C-term missing; [B]
ProSiteProfiles PS51184 JmjC domain profile.
SMART SM00558 cupin_9
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF17811 Jumonji helical domain
PANTHER PTHR23123:SF21 JUMONJI (TRANSCRIPTION FACTOR) DOMAIN PROTEIN-RELATED
SUPERFAMILY SSF51197 Clavaminate synthase-like
Gene3D G3DSA:1.20.58.1360 -
Gene3D G3DSA:2.60.120.650 Cupin
PANTHER PTHR23123 PHD/F-BOX CONTAINING PROTEIN
MapolyID Mapoly0191s0009 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCupin43 Cupin Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g23430.1 chr2:25475553..25484458 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g23430.2 chr2:25475553..25484458 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g23430.3 chr2:25475553..25484456 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g23430.4 chr2:25475553..25484456 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.