Mp2g23700



Description

Annotation

Database ID Description
CDD cd14066 STKc_IRAK
FunFam G3DSA:1.10.510.10:FF:000146 LRR receptor-like serine/threonine-protein kinase IOS1
FunFam G3DSA:3.30.200.20:FF:000039 receptor-like protein kinase FERONIA
FunFam G3DSA:3.80.10.10:FF:000095 LRR receptor-like serine/threonine-protein kinase GSO1
FunFam G3DSA:3.80.10.10:FF:000383 Leucine-rich repeat receptor protein kinase EMS1
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
KOG KOG0472 Leucine-rich repeat protein; [S]
KOG KOG1187 Serine/threonine protein kinase; [T]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR45974 RECEPTOR-LIKE PROTEIN 55
Pfam PF00560 Leucine Rich Repeat
Pfam PF07714 Protein tyrosine and serine/threonine kinase
Pfam PF13855 Leucine rich repeat
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
ProSiteProfiles PS50011 Protein kinase domain profile.
ProSiteProfiles PS51450 Leucine-rich repeat profile.
SMART SM00220 serkin_6
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding
MapolyID Mapoly0069s0019 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

LRR-RLK (Mp2g23700); PTI-responsive marker gene.

0 core 1 peripheral

Yotsui, I., et al. (2023) · Current Biology  research experimental background
LRR-RLK (Mp2g23700); PTI-responsive marker gene.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g23700.1 chr2:28651652..28660326 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g23700 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g23700 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.