Mp2g26670



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:3.30.310.80 Kinase associated domain 1, KA1
ProSiteProfiles PS50011 Protein kinase domain profile.
ProSiteProfiles PS50816 NAF domain profile.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
CDD cd12195 CIPK_C
FunFam G3DSA:1.10.510.10:FF:000279 Non-specific serine/threonine protein kinase
Pfam PF03822 NAF domain
SMART SM00220 serkin_6
FunFam G3DSA:3.30.200.20:FF:000096 Non-specific serine/threonine protein kinase
CDD cd14663 STKc_SnRK3
FunFam G3DSA:3.30.310.80:FF:000002 Non-specific serine/threonine protein kinase
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Pfam PF00069 Protein kinase domain
PANTHER PTHR43895 CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED
Coils Coil Coil
KEGG K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31]
KOG KOG0583 Serine/threonine protein kinase; [T]
MapolyID Mapoly0025s0017 -
GO GO:0005524 ATP binding
GO GO:0004672 protein kinase activity
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0007165 signal transduction

Nomenclature

Gene symbol Product Transcript ID Status
MpCIPK-B CBL-interacting protein kinase Published

Associated Literature (AI-based literature mining, Beta-version)

CBL-interacting kinase in the AtCIPK24/SOS2 clade, the central subject of the study. Salt-downregulated, osmotic-upregulated; interacts with MpCBL-A/B in yeast and all MpCBLs in planta. CRISPR knockouts show increased salt sensitivity (chlorosis/death from 50 mM NaCl) but normal sorbitol tolerance, establishing it as essential for ionic salt-stress signalling.

1 core 0 peripheral

Tansley, C., et al. (2023) · New Phytologist  research experimental subject
CBL-interacting kinase in the AtCIPK24/SOS2 clade, the central subject of the study. Salt-downregulated, osmotic-upregulated; interacts with MpCBL-A/B in yeast and all MpCBLs in planta. CRISPR knockouts show increased salt sensitivity (chlorosis/death from 50 mM NaCl) but normal sorbitol tolerance, establishing it as essential for ionic salt-stress signalling.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26670.1 chr2:32749862..32760022 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g26670 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g26670 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.