Mp2g26680



Description

Annotation

Database ID Description
KOG KOG0385 Chromatin remodeling complex WSTF-ISWI, small subunit; C-term missing; [K]
KOG KOG1244 Predicted transcription factor Requiem/NEURO-D4; N-term missing; [K]
KOG KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain; [Z]
KOG KOG2748 Uncharacterized conserved protein, contains chromo domain; C-term missing; [B]
Gene3D G3DSA:2.30.30.140 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:2.30.30.1150 -
SUPERFAMILY SSF54160 Chromo domain-like
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Gene3D G3DSA:2.40.50.40 -
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
SMART SM00333 TUDOR_7
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
PRINTS PR00929 AT-hook-like domain signature
SMART SM00487 ultradead3
SMART SM00298 chromo_7
Pfam PF00385 Chromo (CHRromatin Organisation MOdifier) domain
SMART SM00490 helicmild6
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR45623 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SMART SM00249 PHD_3
CDD cd04508 TUDOR
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00384 AT_hook_2
PANTHER PTHR45623:SF33 OS01G0881000 PROTEIN
CDD cd18793 SF2_C_SNF
Pfam PF00176 SNF2 family N-terminal domain
MapolyID Mapoly0025s0016 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.12 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26680.1 chr2:29338398..29354750 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.