Mp3g00700



Description

Annotation

Database ID Description
KEGG K22803 structural maintenance of chromosomes protein 5
KOG KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily; [BDL]
KOG KOG0018 Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); N-term missing; C-term missing; [D]
Coils Coil Coil
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF57997 Tropomyosin
Pfam PF02463 RecF/RecN/SMC N terminal domain
CDD cd03277 ABC_SMC5_euk
PANTHER PTHR45916 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
MobiDBLite mobidb-lite consensus disorder prediction
MapolyID Mapoly0007s0066 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC5 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00700.1 chr3:886638..896149 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g00700.2 chr3:884760..896149 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.