Mp3g02200



Description

Annotation

Database ID Description
CDD cd04369 Bromodomain
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47370 Bromodomain
SMART SM00297 bromo_6
ProSiteProfiles PS50014 Bromodomain profile.
PANTHER PTHR34057 ELONGATION FACTOR
Gene3D G3DSA:6.10.250.3170 -
Gene3D G3DSA:1.20.920.10 -
Coils Coil Coil
Pfam PF00439 Bromodomain
KOG KOG1828 IRF-2-binding protein CELTIX-1, contains BROMO domain; C-term missing; [K]
KOG KOG3552 FERM domain protein FRM-8; N-term missing; C-term missing; [R]
KOG KOG0956 PHD finger protein AF10; N-term missing; [R]
MapolyID Mapoly0007s0209 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo7 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g02200.1 chr3:2290222..2300189 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g02200.2 chr3:2290303..2300188 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g02200.3 chr3:2290109..2300190 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g02200.4 chr3:2290222..2300189 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g02200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g02200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.