Mp3g02600
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| FunFam | G3DSA:3.30.110.20:FF:000003 | DNA/RNA-binding protein Alba 1 |
| PANTHER | PTHR13516 | RIBONUCLEASE P SUBUNIT P25 |
| SUPERFAMILY | SSF82704 | AlbA-like |
| Pfam | PF01918 | Alba |
| Gene3D | G3DSA:3.30.110.20 | - |
| KEGG | K14525 | ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] |
| KOG | KOG2567 | Uncharacterized conserved protein; C-term missing; [S] |
| MapolyID | Mapoly0007s0249 | - |
| GO | GO:0003723 | RNA binding |
| GO | GO:0003676 | nucleic acid binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpALBA | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g02600 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g02600.1 ATCCATCAAT CGAGTCTGGC TTGGTTGCTT GTGAGCTCGC GCGGGTTCGA CGCGAAGCGA GGAGCTAAGA TCGATTGCCC GACCAGAGTC GCCCAAGGCC GGGAAGGGGC GCCCAAGCCT GAGGCGAACA GTAAAGATAG ACGCAATTAA CTGGCGAGGT TTATTGAATA TAGAAATTCT GTGGAGGTTT TGGAAGTTTA GATTATAATT CCGGAGAAGT TTGGGGGCTG CCACGGAGGA GTGTGTTCAT CACACACACC GGGAGTCGTC CTTCGAATCC GTGCCCGCTA GGCTTTCTTA TAACCAGGCT TTGGCCGCAC ACTCACTTGG TGTTATTATA TCTTTACATA CTTGATAGGC TCCTTTACGG CCTTGGTCAT ACACTGAAGC GGGTATCTCC CTGGTTGCGG TAGCTAGTAT TCGGGTTTTT TTGTCTGCTT TCAGTTGTGG GGAGAAGGAA CAAAAGCGCC TATGCTCAGC GTTTACTTGT AGGAATTCTT TGAAATTGCA GATTTGGTTC AGGATTTTGC CGCACGCCTC TGTCTCCGTT CTTCGTTGTC ACCATCGTAA TCTTGATTCA CCGTGGCCTC TTGTGTATTC TGTTGGAACT CCGAACCATT GTTTCTCATT TGTGTTGCGC AATTTGCTTT CGTCCCTGTA GTTGTCTCGC ATTAGCTACC GTAGGCGCGT GCACGCACGC TTGGGGCAGG CACTTTGACA CTTTGTCCAC CCGCTTTTGT CCGCTTCAAT CTTGAGAAGT CTCAGTTTCT CCTTTTCAGT TATTGGCGTT TTTGGCCGTC ACTCTGCTTT GTGCTTTGCT TTCTTGGCTA GATCTTGATG TGCTCATTGA TTACCAAATT GGTGGTGGCT TTGATTCTCA TCCAGTTTAC GCTCCCCCGC TGTTGGCCAT CCGCCGATTG TTCACGCGCT GCGAAGATTG TAAAACCGAG AGGGGCCAAG ATACATATTT CTTGAGATCC AAGAACACAG GATCTGATTG CTGTTTATCT AACGAGCTAT GGATCGGTAT CAAAGGGTAG AGAAACCCCG GCCAGAGACT CCGATAAGCG AAAATGAGAT CCGCATCACC ACTCAGGGAA AGATGCGTAA CTACATCACA TATGCGACGA CACTTCTTCA GGTTTTTTAT CGACTCCCTA TTTTTTTCCG CTTTCCTTCA TTCTACTTTT GTATGTAGAG GACTATCGGT TTCGTGCTGC TGTTTGGCAT ACCTTCTCCG GCGCTTCTGC GTTTCCTCCT TTGTCGGCCG TTCCGATTAT GGATGTTCAG CCGAGGGATA GAGACTGCAT ACGACTCTCA TGAACTGCAT ATTTTCAGAA GGCCCTCGTA CCCATAAGGG TTTCTCCTTG AATTTATTTT CGTGAGCCCA GGGTCACCCG CGGTTGTCAT CGGCGTGTCT TGCCTGTCAG CGTGGTGAAC ACTCACTCCA GATTTTCACG CTTGGAGGAC ACCAGTGACG CCCTCGAAGT CTCGGGATCC TGTTAACGCC CCTGGCATCT TCGGTTCAGT AGACTAAACC CTCGCTTTGG AGTGGGAATC TGGAGTTGAG ACCCTCCGCC GGATGATAGA CTATTAGTTT ACAGTGGCCG TTGGAACAGG GGCAGCCGTC AATCGGCCGC TGTGCATTAC GCTGGATCCG AAGTGGAGGA AAAGCATAGA ACAACCGAAT GCTTTTCCGG TAGGGTATAC GTTTTGTACG AGAAGAACCC AGGTTTTTCA ATCACCAGGC CTTACGGTTA AAGCCCTTTC CTGTTTCTTG TCCCATGATC ATTGGTACAC GGCCGATCAC GAATCTGGAT GGACGTCGAG GCATATTATG GATCTGATTG GTACAAGACA TATCGATGGA GCCTATGACG GGATTCATCT TTCATCCGAT TGAGGCATAT CGTTCTCAGA TTAGCACAAA GCCGTGAATG TTTTCACTTA TTCCTCTCTG CGGGAATTGC GGATCTACAA GCTGTCCTCA GTCATTTCGT CTTCTGTCAA GTCCGGAGAT CTTCACTGAC GATTTTCTTG CAGTTATTAT CCAAGGCTGC CGAACTTAAA ATATTAGGGT TCGTCTGCCA CCAAGTGAAT GTACCTGTAC AAGAGCGCGG CCTTTAGGTA TATCTGTTCT GCGTGTTTAG TACAGTATCC GTGTAATCGC CCCCCGCTTT TAGAGATCAT GGTCGAGGTC TTTCCTGTGT AGAGGATATA GCCTACCGAA AGAATCCGGG AGAGGAACAT CTTTGTCCTG CAGATATATT TGGGAGTTAC ATATGTGGAG GCTACCTGGT TTCTGGTTCT TCGGTATCGT GAAACATGTT TATCGGCCAT CGAGCCAGCT GATTCTTCTA ACGAGAACCC TGAAATGCCA GTTCTCGTAC CTATGATGAA TTGAAGCGAG CAACTGATGT GTAATTAATG GGGAGTTCAG GCCTGTACTG ATGCCGAAGA TGTTGCCAGA CCATGACGTT GAGGTGTTCT ACTTGTGATC GAAATATCAG GACAAGGGTG CTTCAGAGAT CGTCTTGAAG GCTATGGGTC GTGCTATTAA CAAGACAGTC ACTATTGCTG AGATTATAAA GGTGAGCATG TACTACTGAA GCAATATCGT TTCCACGTAC CTGCATGAGA AAGCCAGCGA TGATTGGACT CGGTACTCTC TCCCTGCAAT TGCGAAATTG AGTGTCCCTG CCAGGGGCGA GGAGGGCAGT GTACGTTTGA AATTTGATGT GGTCACTAAC TGATATTGCA AACTTCGGTC TGTTTTCAGA GGAGGATTGC GGGCCTTCAC CAGAACACGT CCATTGGTTC CACTGACATC ACGGACCTTT GGCAACCACT TGAAGAGGGC CTGCTTCCGT AAGTTCCACA ATCTTAGTTA GCTGCACTCT CAAGCTCGGA TAGATAGACC TCTGAAGTAC AATTCAATTC TGGTCTGAAG ATATTCCAGT TATCTTAGTT TACGAACATG TTGTCATTAC AGGTTGGAAA CTACACGACA CGTTTCTATG ATAACAATAA CTTTGTCAAC GAAGGAGCTT GACAAGACTT CTACAGGGTA TGTGCTGAAC CTCCACTGAA TACGTCTGAT GCATATCGGA AGATCTTCTC TGCTTGCTTT TTCCTTTCAG CGTTGTGTGC GTGTTTCAAC GGTGTTTGTG TCCTTGTTTG CAACAACTGA TCCTGGTTTT CTTGTCACTT ATCAGATATC AGCCACCACT TCCCGCGGAT CAAGTGAAGC CGTTGGCAGA ATTCGACTTC GAAGGAGGTG GTATGAATTC ATTTAAACTT CATACCTGAG GGGAGTGGAG TGTAATAGAA ATCTTTGTAT CTATTCAGTC TCAAAAGCAG GGCTTCAAAG ACTCAGTTTC ATTTCCCATC AAATAAGATG TGGAGTATTT TCGATTGGAG TTCCTCCTTT GTTAAAACTC TTAGTGACAG CTAACCTTCT ATCCTTTTTC ACTTTTTTTG GGGGGTTCAG AGGGTTCACC TCGTGGTGGA AGGGGCCGTG GTCGAGGCCG TGGGAGAGGC AGAGGCCGAG GAGGTGGTAT TTTTTGATCC ACCCTCATGA AAATTCAAGA GAATGTCTAT TACTTCAAGA CATGCTCTTC TCTGTCTCGA ACCTTTTCTT ACCATGGATT TTTGGGTGTC ATTTGCAGGT AACGGCACTC CGACAGGAGA ATATAATGGC GTTGATGCTG GATGGAGTCG TGGTCGAGGT CGCAGTCGCG GCCGAGGTAG GGGGCGTGCA TTCCGGGGTC GCGGCAGAGG CTTTGGTGGG TCAGACCTAC AGCAAGAGGC AGGAGGCTAT GATGACATAG GTGCTGGTGG TGCCGATGTA GCTCCGCGTG GTCGAGGTAA GCCTTTATGT ACTTGATTCG TAGTGAATTT TACCTCGGAT ACACCTAGAT ACGCAAGCTG ATGATAAAGA TGCCAGTATG ATCTTCTATC TTTCTGTAAG TTATGGGGAC TTGCATCGAT GGAAATAGTA TGAGGATACA TTATCTGACT GTATCATTCA CTGGATGCAG GTGACACAAC TGAAGGTACT GCTGCAATGA AAACCCTTGG AGGTGAGGGC TATACGCTTC ACTGATCTGT CAACATTTGG AGAAGCCCTT CAAGTTCTTG CTCTGCTTCC TTTTATGTTG CACCAGCACG GATACGCGTT TTTGCCTTGG CAACTCGAGT TTAACCGAAG AGTTTTGTGA TTGCGTTCAT GTCAGCTTCT AGCTCCTTTT GCTTGAATGA ATGTCATAGG GCGAAACTAT ACCTTCACTT TTGTGGATCC TGTTGAGGAT CGAAACCTGT TCCCTTGGCC TCGACAATAT ACCTGATTCC CCAAGGGAAC ACAGATGACA ATCATTCACG ATGGTTGTAA GTACTGATGT TCTGGAGATG AGAGTTTCTG TCGAGAAGCT TCATCTGTAC TTGTGTTGCC ATTTTGCAGG GCGTGGGCGG GGTAGAGGAA GGGGACGAGG GAGAGGCCGA GGATTCCGCA CAGACGGTCC AATGCAGGGG GCAGGAGGAG CTGGAGCAAT GTAATGTTTA TATACTGAAG GGCTAGCCTA CTGCAATGGA CCAGTTGGTT GAATCAGTAG TTGCAAAGCA GCTTTCAGTA GAGTTTGAGC TGTTGCACTT TTGCATATGA CAGTTATAAT AGGGCTATTG CTTTGATTTC TGCACTGCAT TGTGAATGTT GGGAGCTTTA TGATGGCCTC TGTGAGAGAA GGCTGTTTTT GCAGAAGTTT TGAACTGGTC ATTGCCGATC |
mRNA UTR + CDS |
| >Mp3g02600.1 ATCCATCAAT CGAGTCTGGC TTGGTTGCTT GTGAGCTCGC GCGGGTTCGA CGCGAAGCGA GGAGCTAAGA TCGATTGCCC GACCAGAGTC GCCCAAGGCC GGGAAGGGGC GCCCAAGCCT GAGGCGAACA GTAAAGATAG ACGCAATTAA CTGGCGAGGT TTATTGAATA TAGAAATTCT GTGGAGGTTT TGGAAGTTTA GATTATAATT CCGGAGAAGT TTGGGGGCTG CCACGGAGGA GTGTGTTCAT CACACACACC GGGAGTCGTC CTTCGAATCC GTGCCCGCTA GGCTTTCTTA TAACCAGGCT TTGGCCGCAC ACTCACTTGG TGTTATTATA TCTTTACATA CTTGATAGGC TCCTTTACGG CCTTGGTCAT ACACTGAAGC GGTTTACGCT CCCCCGCTGT TGGCCATCCG CCGATTGTTC ACGCGCTGCG AAGATTGTAA AACCGAGAGG GGCCAAGATA CATATTTCTT GAGATCCAAG AACACAGGAT CTGATTGCTG TTTATCTAAC GAGCTATGGA TCGGTATCAA AGGGTAGAGA AACCCCGGCC AGAGACTCCG ATAAGCGAAA ATGAGATCCG CATCACCACT CAGGGAAAGA TGCGTAACTA CATCACATAT GCGACGACAC TTCTTCAGGA CAAGGGTGCT TCAGAGATCG TCTTGAAGGC TATGGGTCGT GCTATTAACA AGACAGTCAC TATTGCTGAG ATTATAAAGA GGAGGATTGC GGGCCTTCAC CAGAACACGT CCATTGGTTC CACTGACATC ACGGACCTTT GGCAACCACT TGAAGAGGGC CTGCTTCCGT TGGAAACTAC ACGACACGTT TCTATGATAA CAATAACTTT GTCAACGAAG GAGCTTGACA AGACTTCTAC AGGATATCAG CCACCACTTC CCGCGGATCA AGTGAAGCCG TTGGCAGAAT TCGACTTCGA AGGAGGTGAG GGTTCACCTC GTGGTGGAAG GGGCCGTGGT CGAGGCCGTG GGAGAGGCAG AGGCCGAGGA GGTAACGGCA CTCCGACAGG AGAATATAAT GGCGTTGATG CTGGATGGAG TCGTGGTCGA GGTCGCAGTC GCGGCCGAGG TAGGGGGCGT GCATTCCGGG GTCGCGGCAG AGGCTTTGGT GGGTCAGACC TACAGCAAGA GGCAGGAGGC TATGATGACA TAGGTGCTGG TGGTGCCGAT GTAGCTCCGC GTGGTCGAGG TGACACAACT GAAGGTACTG CTGCAATGAA AACCCTTGGA GGGCGTGGGC GGGGTAGAGG AAGGGGACGA GGGAGAGGCC GAGGATTCCG CACAGACGGT CCAATGCAGG GGGCAGGAGG AGCTGGAGCA ATGTAATGTT TATATACTGA AGGGCTAGCC TACTGCAATG GACCAGTTGG TTGAATCAGT AGTTGCAAAG CAGCTTTCAG TAGAGTTTGA GCTGTTGCAC TTTTGCATAT GACAGTTATA ATAGGGCTAT TGCTTTGATT TCTGCACTGC ATTGTGAATG TTGGGAGCTT TATGATGGCC TCTGTGAGAG AAGGCTGTTT TTGCAGAAGT TTTGAACTGG TCATTGCCGA TC |
CDS |
| >Mp3g02600.1 ATGGATCGGT ATCAAAGGGT AGAGAAACCC CGGCCAGAGA CTCCGATAAG CGAAAATGAG ATCCGCATCA CCACTCAGGG AAAGATGCGT AACTACATCA CATATGCGAC GACACTTCTT CAGGACAAGG GTGCTTCAGA GATCGTCTTG AAGGCTATGG GTCGTGCTAT TAACAAGACA GTCACTATTG CTGAGATTAT AAAGAGGAGG ATTGCGGGCC TTCACCAGAA CACGTCCATT GGTTCCACTG ACATCACGGA CCTTTGGCAA CCACTTGAAG AGGGCCTGCT TCCGTTGGAA ACTACACGAC ACGTTTCTAT GATAACAATA ACTTTGTCAA CGAAGGAGCT TGACAAGACT TCTACAGGAT ATCAGCCACC ACTTCCCGCG GATCAAGTGA AGCCGTTGGC AGAATTCGAC TTCGAAGGAG GTGAGGGTTC ACCTCGTGGT GGAAGGGGCC GTGGTCGAGG CCGTGGGAGA GGCAGAGGCC GAGGAGGTAA CGGCACTCCG ACAGGAGAAT ATAATGGCGT TGATGCTGGA TGGAGTCGTG GTCGAGGTCG CAGTCGCGGC CGAGGTAGGG GGCGTGCATT CCGGGGTCGC GGCAGAGGCT TTGGTGGGTC AGACCTACAG CAAGAGGCAG GAGGCTATGA TGACATAGGT GCTGGTGGTG CCGATGTAGC TCCGCGTGGT CGAGGTGACA CAACTGAAGG TACTGCTGCA ATGAAAACCC TTGGAGGGCG TGGGCGGGGT AGAGGAAGGG GACGAGGGAG AGGCCGAGGA TTCCGCACAG ACGGTCCAAT GCAGGGGGCA GGAGGAGCTG GAGCAATGTA A |
Protein |
| >Mp3g02600.1 MDRYQRVEKP RPETPISENE IRITTQGKMR NYITYATTLL QDKGASEIVL KAMGRAINKT VTIAEIIKRR IAGLHQNTSI GSTDITDLWQ PLEEGLLPLE TTRHVSMITI TLSTKELDKT STGYQPPLPA DQVKPLAEFD FEGGEGSPRG GRGRGRGRGR GRGRGGNGTP TGEYNGVDAG WSRGRGRSRG RGRGRAFRGR GRGFGGSDLQ QEAGGYDDIG AGGADVAPRG RGDTTEGTAA MKTLGGRGRG RGRGRGRGRG FRTDGPMQGA GGAGAM |