Mp3g04970



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.10.10.60:FF:000002 Myb family transcription factor
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
SUPERFAMILY SSF46689 Homeodomain-like
Pfam PF00249 Myb-like DNA-binding domain
PANTHER PTHR31496 TRANSCRIPTION FACTOR KAN2-RELATED
MapolyID Mapoly0022s0032 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000976 transcription cis-regulatory region binding
GO GO:0010158 abaxial cell fate specification
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGARP1 transcription factor, GARP Published
MpKAN transcription factor, GARP Provisional

Associated Literature (AI-based literature mining, Beta-version)

MpKAN locus (v6.1 Mp3g04970.1), the KANADI gene studied here. Loss-of-function, complementation and inducible-overexpression lines showed it regulates apical branching, dorsal thallus differentiation and FR-induced gametangiophore formation in the gametophyte.

1 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental subject
MpKAN locus (v6.1 Mp3g04970.1), the KANADI gene studied here. Loss-of-function, complementation and inducible-overexpression lines showed it regulates apical branching, dorsal thallus differentiation and FR-induced gametangiophore formation in the gametophyte.
Sakai Y, Takami H, Yamaoka S, Kato H, Fukaki H, Kohchi T, Ishizaki K. (2025) · The New phytologist  research citation background
Cited GARP transcription factor in gemma cup development context.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g04970.1 chr3:5258383..5266516 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g04970 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g04970 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.