Mp3g07130
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PRINTS | PR00259 | Transmembrane four family signature |
| PANTHER | PTHR32191 | TETRASPANIN-8-RELATED |
| Pfam | PF00335 | Tetraspanin family |
| KOG | KOG3882 | Tetraspanin family integral membrane protein; C-term missing; [R] |
| MapolyID | Mapoly0006s0186 | - |
| GO | GO:0009734 | auxin-activated signaling pathway |
| GO | GO:0005886 | plasma membrane |
| GO | GO:0016020 | membrane |
| GO | GO:0009506 | plasmodesma |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpTET3a | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g07130 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g07130.1 GGGGTCGTGA TTTCGAACAG CTCGCTCGTT CATCGGCACT AGCAGCAGCT GCAAAATCTG CAGAGCCGTG CAGACGCACA CAAGTTGTCG AGGTCGGCGC CCCGCCAGTT CGCCAATTCG CTCGTCGTAG ATTTGTAGGA TCCGTTGGAA AACATCGGGA GATTGCCACT CTCAAGGCGA GCAGGCCAGA AATTCGATAA AAAAGACGCC CGTGTTATCA ACTTTGGGGT GAACAGCAGA TTTTGATTGG CTGTTTTTTG ACAGGAGGAG GGGATCAGTT GATTTTTGTT GGGTGTCGGA GGACAGCGAT TCCGCCAGGC TCGTCGAGAT GAAGTTCAGT AATACGCTTA TTGTGATATG GAATACTATT ACTCTTCTGG GCTCGGCTGT AATTATCGGA GCCGGCATTT GGTTGGCCAC GAAGCATGAA AATACCACCT GCATCAAATT TTTGCAGTGG CCGATTATCA TTCTCGGGAT CTTCGTGCTC GTGGTTTCGA TATTCGGGTT CGTTGGCGCG TGCTCGAAAA ATGTGTGCTT CTTATGGATC TATCTCGCGG TGACGTTCAT CCTCATTCTG CTGCTCGTCA TTTTCACCAT CTTCGCTTTC GTAGTCACCA ACAAAGGTGC AGGGGAAGCG CTATCCAATA AAGGATTCAA GGAGTACAGA CTCGGGGACT ATTCAAACTG GCTGCAGAAG CGCGTGGAGA AGCAGAGCAA CTGGGACAAG ATCCAGAGCT GCTTGGCCGA TGCCAAGGTC TGCAACGATA TGAACAACGA CTATCCTACA GAAGCTGCCT TCAACGCCGC CAATCTTACC CCACTAGAGG TAAATTTCAA TCCTTTCATT CCTTTGCAGC ATCACCTCGA GAGGCTATAC TTTCCTATCA GTACTTCGCC TTAGCTTGCA GACCAGCCCC GATTGCACTC ATTGACTACC TGTGTTCCAG AATACCCTGT TGTTTTGGAC TTGAGCTTTG AACGCCTGAA CGTGAGGTCC GTCATTCGGA TCATCTGCTC AGCCACTCTG CAGCTACAGA ATGTCATTTA GTCATCGACC GAGTCGTGCT GAAGGAACAA CCACCTCCTT TGTGATAAGG GATACGTACG GCCTCCTTCG CAATCTGATG TTGTGGTTAT TTTTCTGTGC AGTCTGGCTG TTGCAAGCCG CCCGTGGAGT GTAACTTCCA ATTCGTCAAT GCAACGGCAT GGACCGCGCC GACTCCAATA ACCTCGAACA ATACCGACTG TACTAAGTGG AGTGACGATC CAAAGATTCT TTGCTTCGAA TGTGATTCGT GCAAGGCTGG AGTTCTACAG AATGTTAAAA AGGACTGGCG CAAAGTGGCG ACAGTGTTAA TTGTCACTTT GGTCATCATG ATCATCGTGT ACACTATTGG TTGCTGTGCA TTCAGAAATG CTCGCAGGGG CGGTTCTTAC ACGAAGCAAG GTTATGGACC ATAGAGTTTG AGAAGAGAAT CATCACATGT AGTTATTCTT CTGCGCAGGT AGTCAGACAA TTGTTACCGT CTTTCGTTCG CGTACGCTAT TGGAGACTAG TGTAAAATTG CATACGCAGA TACGTATAGC GATCGATTTT GTGCATAAAT TGTATTTTGG CTTGGAAGGA CGCTACTGTC CCATTTTGTG ATCGTCTGCT ACGGTCGAGA AACAGCAATA TTTTGTTGAT TAGCATAGGT ACTTAGGTTG CGACCAGGTC ATTCATTCCT GTGCTCCAGA TAGCATTTCA ATTCAAAGGC CCG |
mRNA UTR + CDS |
| >Mp3g07130.1 GGGGTCGTGA TTTCGAACAG CTCGCTCGTT CATCGGCACT AGCAGCAGCT GCAAAATCTG CAGAGCCGTG CAGACGCACA CAAGTTGTCG AGGTCGGCGC CCCGCCAGTT CGCCAATTCG CTCGTCGTAG ATTTGTAGGA TCCGTTGGAA AACATCGGGA GATTGCCACT CTCAAGGCGA GCAGGCCAGA AATTCGATAA AAAAGACGCC CGTGTTATCA ACTTTGGGGT GAACAGCAGA TTTTGATTGG CTGTTTTTTG ACAGGAGGAG GGGATCAGTT GATTTTTGTT GGGTGTCGGA GGACAGCGAT TCCGCCAGGC TCGTCGAGAT GAAGTTCAGT AATACGCTTA TTGTGATATG GAATACTATT ACTCTTCTGG GCTCGGCTGT AATTATCGGA GCCGGCATTT GGTTGGCCAC GAAGCATGAA AATACCACCT GCATCAAATT TTTGCAGTGG CCGATTATCA TTCTCGGGAT CTTCGTGCTC GTGGTTTCGA TATTCGGGTT CGTTGGCGCG TGCTCGAAAA ATGTGTGCTT CTTATGGATC TATCTCGCGG TGACGTTCAT CCTCATTCTG CTGCTCGTCA TTTTCACCAT CTTCGCTTTC GTAGTCACCA ACAAAGGTGC AGGGGAAGCG CTATCCAATA AAGGATTCAA GGAGTACAGA CTCGGGGACT ATTCAAACTG GCTGCAGAAG CGCGTGGAGA AGCAGAGCAA CTGGGACAAG ATCCAGAGCT GCTTGGCCGA TGCCAAGGTC TGCAACGATA TGAACAACGA CTATCCTACA GAAGCTGCCT TCAACGCCGC CAATCTTACC CCACTAGAGT CTGGCTGTTG CAAGCCGCCC GTGGAGTGTA ACTTCCAATT CGTCAATGCA ACGGCATGGA CCGCGCCGAC TCCAATAACC TCGAACAATA CCGACTGTAC TAAGTGGAGT GACGATCCAA AGATTCTTTG CTTCGAATGT GATTCGTGCA AGGCTGGAGT TCTACAGAAT GTTAAAAAGG ACTGGCGCAA AGTGGCGACA GTGTTAATTG TCACTTTGGT CATCATGATC ATCGTGTACA CTATTGGTTG CTGTGCATTC AGAAATGCTC GCAGGGGCGG TTCTTACACG AAGCAAGGTT ATGGACCATA GAGTTTGAGA AGAGAATCAT CACATGTAGT TATTCTTCTG CGCAGGTAGT CAGACAATTG TTACCGTCTT TCGTTCGCGT ACGCTATTGG AGACTAGTGT AAAATTGCAT ACGCAGATAC GTATAGCGAT CGATTTTGTG CATAAATTGT ATTTTGGCTT GGAAGGACGC TACTGTCCCA TTTTGTGATC GTCTGCTACG GTCGAGAAAC AGCAATATTT TGTTGATTAG CATAGGTACT TAGGTTGCGA CCAGGTCATT CATTCCTGTG CTCCAGATAG CATTTCAATT CAAAGGCCCG |
CDS |
| >Mp3g07130.1 ATGAAGTTCA GTAATACGCT TATTGTGATA TGGAATACTA TTACTCTTCT GGGCTCGGCT GTAATTATCG GAGCCGGCAT TTGGTTGGCC ACGAAGCATG AAAATACCAC CTGCATCAAA TTTTTGCAGT GGCCGATTAT CATTCTCGGG ATCTTCGTGC TCGTGGTTTC GATATTCGGG TTCGTTGGCG CGTGCTCGAA AAATGTGTGC TTCTTATGGA TCTATCTCGC GGTGACGTTC ATCCTCATTC TGCTGCTCGT CATTTTCACC ATCTTCGCTT TCGTAGTCAC CAACAAAGGT GCAGGGGAAG CGCTATCCAA TAAAGGATTC AAGGAGTACA GACTCGGGGA CTATTCAAAC TGGCTGCAGA AGCGCGTGGA GAAGCAGAGC AACTGGGACA AGATCCAGAG CTGCTTGGCC GATGCCAAGG TCTGCAACGA TATGAACAAC GACTATCCTA CAGAAGCTGC CTTCAACGCC GCCAATCTTA CCCCACTAGA GTCTGGCTGT TGCAAGCCGC CCGTGGAGTG TAACTTCCAA TTCGTCAATG CAACGGCATG GACCGCGCCG ACTCCAATAA CCTCGAACAA TACCGACTGT ACTAAGTGGA GTGACGATCC AAAGATTCTT TGCTTCGAAT GTGATTCGTG CAAGGCTGGA GTTCTACAGA ATGTTAAAAA GGACTGGCGC AAAGTGGCGA CAGTGTTAAT TGTCACTTTG GTCATCATGA TCATCGTGTA CACTATTGGT TGCTGTGCAT TCAGAAATGC TCGCAGGGGC GGTTCTTACA CGAAGCAAGG TTATGGACCA TAG |
Protein |
| >Mp3g07130.1 MKFSNTLIVI WNTITLLGSA VIIGAGIWLA TKHENTTCIK FLQWPIIILG IFVLVVSIFG FVGACSKNVC FLWIYLAVTF ILILLLVIFT IFAFVVTNKG AGEALSNKGF KEYRLGDYSN WLQKRVEKQS NWDKIQSCLA DAKVCNDMNN DYPTEAAFNA ANLTPLESGC CKPPVECNFQ FVNATAWTAP TPITSNNTDC TKWSDDPKIL CFECDSCKAG VLQNVKKDWR KVATVLIVTL VIMIIVYTIG CCAFRNARRG GSYTKQGYGP |