Mp3g07610



Description

Annotation

Database ID Description
SMART SM00558 cupin_9
SMART SM00355 c2h2final6
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:3.30.160.60:FF:000747 Probable lysine-specific demethylase ELF6
PANTHER PTHR10694 LYSINE-SPECIFIC DEMETHYLASE
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
FunFam G3DSA:3.30.160.60:FF:000446 Zinc finger protein
SMART SM00545 JmjN_1
ProSiteProfiles PS51183 JmjN domain profile.
SUPERFAMILY SSF51197 Clavaminate synthase-like
ProSiteProfiles PS51184 JmjC domain profile.
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
Gene3D G3DSA:2.60.120.650 Cupin
Pfam PF02375 jmjN domain
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
Pfam PF02373 JmjC domain, hydroxylase
KOG KOG1246 DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain; C-term missing; [R]
KOG KOG2462 C2H2-type Zn-finger protein; N-term missing; [K]
MapolyID Mapoly0006s0237 -

Nomenclature

Gene symbol Product Transcript ID Status
MpREF6 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g07610.1 chr3:7847467..7865815 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.