Mp3g08270



Description

Annotation

Database ID Description
SMART SM00350 mcm
ProSiteProfiles PS50051 MCM family domain profile.
CDD cd22247 MCM8_WHD
Gene3D G3DSA:2.40.50.140 -
Gene3D G3DSA:3.40.50.300 -
Pfam PF00493 MCM P-loop domain
FunFam G3DSA:2.20.28.10:FF:000007 DNA helicase MCM8 isoform X1
SMART SM00382 AAA_5
Gene3D G3DSA:2.20.28.10 -
PANTHER PTHR11630 DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Pfam PF17207 MCM OB domain
PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature
Pfam PF17855 MCM AAA-lid domain
CDD cd17759 MCM8
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF50249 Nucleic acid-binding proteins
KEGG K10737 DNA helicase MCM8 [EC:5.6.2.4]
KOG KOG0480 DNA replication licensing factor, MCM6 component; [L]
MapolyID Mapoly0006s0301 -
GO GO:0005634 nucleus
GO GO:0005524 ATP binding
GO GO:0032508 DNA duplex unwinding
GO GO:0042555 MCM complex
GO GO:0017116 single-stranded DNA helicase activity
GO GO:0016887 ATP hydrolysis activity
GO GO:0003697 single-stranded DNA binding
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpMCM8 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g08270.1 chr3:8411561..8417774 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g08270 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g08270 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.