Mp3g09150



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.10 -
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:1.10.8.430 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
Coils Coil Coil
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
FunFam G3DSA:1.10.8.430:FF:000003 Probable disease resistance protein At5g66910
Pfam PF13855 Leucine rich repeat
PANTHER PTHR36766 PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8
Gene3D G3DSA:1.20.930.20 -
PRINTS PR00364 Disease resistance protein signature
Pfam PF00560 Leucine Rich Repeat
Pfam PF00931 NB-ARC domain
KOG KOG4658 Apoptotic ATPase; [T]
MapolyID Mapoly0105s0002 -
GO GO:0043531 ADP binding
GO GO:0005515 protein binding
GO GO:0050832 defense response to fungus
GO GO:0007166 cell surface receptor signaling pathway

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR5 NBS genes, pathogen-related Provisional
MpCNL1 CC-type NLR immune receptor Published

Associated Literature (AI-based literature mining, Beta-version)

CC-type NLR immune receptor (from nomenclature)

0 core 1 peripheral

Jibran, R., et al. (2024b) · Frontiers in Plant Science  research experimental background
MpNBS-LRR5 resistance gene; DEG in Mpccd7.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g09150.1 chr3:9537767..9542605 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g09150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g09150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.