Mp3g09200



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.8.430:FF:000003 Probable disease resistance protein At5g66910
Coils Coil Coil
Gene3D G3DSA:1.10.10.10 -
Gene3D G3DSA:1.20.930.20 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00931 NB-ARC domain
PRINTS PR00364 Disease resistance protein signature
Pfam PF13855 Leucine rich repeat
SUPERFAMILY SSF52058 L domain-like
Gene3D G3DSA:1.10.8.430 -
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR36766 PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8
KOG KOG4658 Apoptotic ATPase; [T]
MapolyID Mapoly3272s0001 -
GO GO:0050832 defense response to fungus
GO GO:0043531 ADP binding
GO GO:0005515 protein binding
GO GO:0007166 cell surface receptor signaling pathway

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR6 NBS genes Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g09200.1 chr3:9590964..9596176 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g09200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g09200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.