Mp3g09480



Description

Annotation

Database ID Description
Gene3D G3DSA:2.30.30.490 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47527 RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN
Pfam PF01426 BAH domain
ProSiteProfiles PS51038 BAH domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
Coils Coil Coil
CDD cd04370 BAH
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00439 BAH_4
Pfam PF00628 PHD-finger
CDD cd15489 PHD_SF
SMART SM00249 PHD_3
KOG KOG1886 BAH domain proteins; C-term missing; [K]
KOG KOG1245 Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains); N-term missing; [B]
MapolyID Mapoly0085s0079 -
GO GO:0003682 chromatin binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBAH5 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g09480.1 chr3:9943476..9951097 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g09480 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g09480 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.