Mp3g09590



Description

Annotation

Database ID Description
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.40.50.1010 -
PANTHER PTHR35744 C2H2-TYPE DOMAIN-CONTAINING PROTEIN
SUPERFAMILY SSF53822 Periplasmic binding protein-like I
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
SMART SM00355 c2h2final6
CDD cd18725 PIN_LabA-like
MapolyID Mapoly0085s0068 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC2H2-20 transcription factor, C2H2-ZnF Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g09590.1 chr3:10019308..10021155 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g09590.2 chr3:10017843..10021155 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g09590 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g09590 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.