Mp3g10160
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd22274 | DPBB_EXPA_N |
| Pfam | PF01357 | Expansin C-terminal domain |
| PANTHER | PTHR31867 | EXPANSIN-A15 |
| Gene3D | G3DSA:2.40.40.10 | - |
| ProSiteProfiles | PS50843 | Expansin, Cellulose-binding-like domain profile. |
| ProSiteProfiles | PS50842 | Expansin, family-45 endoglucanase-like domain profile. |
| SMART | SM00837 | dpbb_1 |
| PRINTS | PR01225 | Expansin/Lol pI family signature |
| PRINTS | PR01226 | Expansin signature |
| Gene3D | G3DSA:2.60.40.760 | - |
| SUPERFAMILY | SSF49590 | PHL pollen allergen |
| SUPERFAMILY | SSF50685 | Barwin-like endoglucanases |
| Pfam | PF03330 | Lytic transglycolase |
| KEGG | K20628 | expansin |
| MapolyID | Mapoly0085s0011 | - |
| GO | GO:0005576 | extracellular region |
| GO | GO:0009664 | plant-type cell wall organization |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpExpansin25 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g10160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g10160.1 CTTCGTCTTC TGCAGACTTA GAACTTGGCC TTGAGCTCTA GGTCTGCATC CACGTTTCCG TCTTCGAAAT CTGCTTTGAC AAAAAAGGTA GGAAAGCTAA TGATCCAATG CCGTTCCATA CATTCGAAAC AGGTGACATG AGTACTGATG GTATTCTGAT CAAGGTAGCA GCCCATCAGG TTGCCAGTTT TAGGTAGAAT CGTCAAGAAT CAGATAGTTG TTCGAGTGTT CTAGCCTGTA ACTCACCAGC TTTTGAAGGC AAATCTATGT ACTCGAACGA GCTGATCCTT TGCTATCGGC TGAAGTGATG GAGACAGACA GAAGCTAAAG TCAGTCGACA AAGATTAAAG AGTACGCGTT TTATAAGTTA GTGGTGGATT CTTCTGTTTA GCACTCAGAA TGCAGTGAAG AGTAACACTT TCTCATTTGA TTCTGCAGGC AGATGACTAT GTCACCTAAA ATGGCTCTGT TGAGCGTTCT GGTGACCACA CTGATGCTTA TGTGCATCCA GCCGAGTCGT GTGAATGCAC AAGGTGCACT TTACAACGCG ACCACTTGGA CCAATGCGAC TGCCACGTTC TATGGTGGAG ACGATGGAGC TGGGACAATG GGTGCGTTAG CTGCCACTTG GGATGGCCCA ATGCCAAGTT CACTGAGTGT CAAAAGACTA GGCGTAATAA TTTGCATGTC GCATACCATA TATCCAATAG GAGAACTGCA AATAAGATTC AGTGTGTGCA ACATGCGTGT CGAGCAAATG CTGATGCTTT CTCGGTATCC TTGCAGGAGG AGCTTGTGGT TATGGAAACA TGTTCACAAG AGGATACGGA CTAGAAACGG CTGCTCTAAG CACAGTCCTA TTCAACAATG GGTTAACTTG CGGAGCATGC TTTATGCTGA AGTGCAGGTT GAATGAGTCA AGATGGTGCT ACTCCAACGT AAGCTCCATC ACAATAAGTG CCACCAATTT TTGTCCTCCC AACCTAAACA GGACAACTGA TGGCTGGTGC AATCTGCCAA GATCTCACTT CGACCTGTCC GTCAAAATGT TCACAACACT TGCCCGAGCA GTTGGAGGCA TCATCCCAGT TCTGTACAAA AGGTATAGTA GTTCAATTAT ACGGCTCATC TCTGCTCACT ACGAAATTTT CTGGTAGACT TTGGAAGAGA TAAAGCGGGA GATTGAGATA CTAAGGTCTG ACGCTTTATC GGGTCAATCT TCTGATTCAA CACCTTCCGA ACAAATGCAG GAAGACGTGA CTTTGAAAAT GATTCCAAAT CTGAACCACT TTTGTCGTGC TTTTGCTGCT GCAGAGTGCC ATGTGTAAAG ACAGGAGGAG TTCGATTCAC GCTGAATGGA AACCCATGGT TTAACCTTGT GCTCATTAGC AACGTGGGAG GGCAGGGGAA TGTGGTGGCT GCTCAGATGA AAGGCTCTAA AACTGCCTGG TTCAACATGA GGCAGAACTG GGGTCAAAAC TGGGAGCTCG GTCAGAAGTT GATCAACCAG ACCCTCTCAT TCCGACTCAC GTTAGGCCTG GGACAAACTT TGACCTTCAA CAATCTGACA ACGCCCGATT GGAAATTTGG GCAGACGTGG GAAGCAGATA CGAATTTCCC CGCCTCCATC AGTAGGTAGA AACCACCGAT AAGCTGACGA GTTTGAGTCT TGTGATCCAG TGGGAAAACA AGTCGAATTC ACACGTAGCA CGGTCACCGG TCACGGTTTC TGGCACCAGT AAACACCAGG AATTTTACTG CAAGACTAGA GTGAACAAGC ATTCTTGCAT CATCATCGTT CTGAGTCGAT TGGAAGGTCA TTAGACTACC TAAAGTCAGC AGATGGTGGC AAGTACGCCC ATATAGGTAA TTCAGCTGGT TTAGATTTGA ATTATGCATC TTAGCATGGT GTTATAATCG TGGTAGAAAG GCCAGCAAAA GCCTTCAACC CAATCATTGG GTCCATATAC CTGAAACTTC GCTGAAGAAA TCATTCTTAT GTAGAGTTTA GAGGTACATG CTAGACATCA ATTAGTTCGG AACATACGAA GTCACTTCGC AGGACGTACA AAATCATCTA ATGATCTGAT TTTGAGGCCC ATGTCGTCTA TGTACACATT CTTAGATGAG AGTACAACTT AAAACTCATT AGCTTGACGC CATGGCTTAC GAATCCGGGG TATCAAAGAG CGTCATGCTC CACACGGGTA GAAGTCTTGG GCCAACATTG TAAATTCAAG GTGCTTGAAT GCAGCATCAG TTTCCTTGTC TATAGAAGAA TTAAACTTGA TTCTGAGTTT TTTCCTTCCG AG |
mRNA UTR + CDS |
| >Mp3g10160.1 CTTCGTCTTC TGCAGACTTA GAACTTGGCC TTGAGCTCTA GGTCTGCATC CACGTTTCCG TCTTCGAAAT CTGCTTTGAC AAAAAAGGCA GATGACTATG TCACCTAAAA TGGCTCTGTT GAGCGTTCTG GTGACCACAC TGATGCTTAT GTGCATCCAG CCGAGTCGTG TGAATGCACA AGGTGCACTT TACAACGCGA CCACTTGGAC CAATGCGACT GCCACGTTCT ATGGTGGAGA CGATGGAGCT GGGACAATGG GAGGAGCTTG TGGTTATGGA AACATGTTCA CAAGAGGATA CGGACTAGAA ACGGCTGCTC TAAGCACAGT CCTATTCAAC AATGGGTTAA CTTGCGGAGC ATGCTTTATG CTGAAGTGCA GGTTGAATGA GTCAAGATGG TGCTACTCCA ACGTAAGCTC CATCACAATA AGTGCCACCA ATTTTTGTCC TCCCAACCTA AACAGGACAA CTGATGGCTG GTGCAATCTG CCAAGATCTC ACTTCGACCT GTCCGTCAAA ATGTTCACAA CACTTGCCCG AGCAGTTGGA GGCATCATCC CAGTTCTGTA CAAAAGAGTG CCATGTGTAA AGACAGGAGG AGTTCGATTC ACGCTGAATG GAAACCCATG GTTTAACCTT GTGCTCATTA GCAACGTGGG AGGGCAGGGG AATGTGGTGG CTGCTCAGAT GAAAGGCTCT AAAACTGCCT GGTTCAACAT GAGGCAGAAC TGGGGTCAAA ACTGGGAGCT CGGTCAGAAG TTGATCAACC AGACCCTCTC ATTCCGACTC ACGTTAGGCC TGGGACAAAC TTTGACCTTC AACAATCTGA CAACGCCCGA TTGGAAATTT GGGCAGACGT GGGAAGCAGA TACGAATTTC CCCGCCTCCA TCAGTAGGTA GAAACCACCG ATAAGCTGAC GAGTTTGAGT CTTGTGATCC AGTGGGAAAA CAAGTCGAAT TCACACGTAG CACGGTCACC GGTCACGGTT TCTGGCACCA GTAAACACCA GGAATTTTAC TGCAAGACTA GAGTGAACAA GCATTCTTGC ATCATCATCG TTCTGAGTCG ATTGGAAGGT CATTAGACTA CCTAAAGTCA GCAGATGGTG GCAAGTACGC CCATATAGGT AATTCAGCTG GTTTAGATTT GAATTATGCA TCTTAGCATG GTGTTATAAT CGTGGTAGAA AGGCCAGCAA AAGCCTTCAA CCCAATCATT GGGTCCATAT ACCTGAAACT TCGCTGAAGA AATCATTCTT ATGTAGAGTT TAGAGGTACA TGCTAGACAT CAATTAGTTC GGAACATACG AAGTCACTTC GCAGGACGTA CAAAATCATC TAATGATCTG ATTTTGAGGC CCATGTCGTC TATGTACACA TTCTTAGATG AGAGTACAAC TTAAAACTCA TTAGCTTGAC GCCATGGCTT ACGAATCCGG GGTATCAAAG AGCGTCATGC TCCACACGGG TAGAAGTCTT GGGCCAACAT TGTAAATTCA AGGTGCTTGA ATGCAGCATC AGTTTCCTTG TCTATAGAAG AATTAAACTT GATTCTGAGT TTTTTCCTTC CGAG |
CDS |
| >Mp3g10160.1 ATGACTATGT CACCTAAAAT GGCTCTGTTG AGCGTTCTGG TGACCACACT GATGCTTATG TGCATCCAGC CGAGTCGTGT GAATGCACAA GGTGCACTTT ACAACGCGAC CACTTGGACC AATGCGACTG CCACGTTCTA TGGTGGAGAC GATGGAGCTG GGACAATGGG AGGAGCTTGT GGTTATGGAA ACATGTTCAC AAGAGGATAC GGACTAGAAA CGGCTGCTCT AAGCACAGTC CTATTCAACA ATGGGTTAAC TTGCGGAGCA TGCTTTATGC TGAAGTGCAG GTTGAATGAG TCAAGATGGT GCTACTCCAA CGTAAGCTCC ATCACAATAA GTGCCACCAA TTTTTGTCCT CCCAACCTAA ACAGGACAAC TGATGGCTGG TGCAATCTGC CAAGATCTCA CTTCGACCTG TCCGTCAAAA TGTTCACAAC ACTTGCCCGA GCAGTTGGAG GCATCATCCC AGTTCTGTAC AAAAGAGTGC CATGTGTAAA GACAGGAGGA GTTCGATTCA CGCTGAATGG AAACCCATGG TTTAACCTTG TGCTCATTAG CAACGTGGGA GGGCAGGGGA ATGTGGTGGC TGCTCAGATG AAAGGCTCTA AAACTGCCTG GTTCAACATG AGGCAGAACT GGGGTCAAAA CTGGGAGCTC GGTCAGAAGT TGATCAACCA GACCCTCTCA TTCCGACTCA CGTTAGGCCT GGGACAAACT TTGACCTTCA ACAATCTGAC AACGCCCGAT TGGAAATTTG GGCAGACGTG GGAAGCAGAT ACGAATTTCC CCGCCTCCAT CAGTAGGTAG |
Protein |
| >Mp3g10160.1 MTMSPKMALL SVLVTTLMLM CIQPSRVNAQ GALYNATTWT NATATFYGGD DGAGTMGGAC GYGNMFTRGY GLETAALSTV LFNNGLTCGA CFMLKCRLNE SRWCYSNVSS ITISATNFCP PNLNRTTDGW CNLPRSHFDL SVKMFTTLAR AVGGIIPVLY KRVPCVKTGG VRFTLNGNPW FNLVLISNVG GQGNVVAAQM KGSKTAWFNM RQNWGQNWEL GQKLINQTLS FRLTLGLGQT LTFNNLTTPD WKFGQTWEAD TNFPASISR |