Mp3g10530



Description

Annotation

Database ID Description
CDD cd14066 STKc_IRAK
FunFam G3DSA:1.10.510.10:FF:000287 probable LRR receptor-like serine/threonine-protein kinase RKF3
FunFam G3DSA:3.30.200.20:FF:000542 Receptor-like serine/threonine-protein kinase At4g25390
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
KOG KOG1187 Serine/threonine protein kinase; [T]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47989 OS01G0750732 PROTEIN
Pfam PF07714 Protein tyrosine and serine/threonine kinase
Pfam PF19160 SPARK
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
ProSiteProfiles PS50011 Protein kinase domain profile.
SMART SM00220 serkin_6
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding
MapolyID Mapoly0037s0143 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RKF3c Receptor-like Kinase (RLK) Provisional

Associated Literature (AI-based literature mining)

Receptor-like Kinase (RLK) (from nomenclature)

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Serine/threonine protein kinase; listed in Table 1 as a candidate MpKAN-regulated DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g10530.1 chr3:10887495..10891037 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g10530 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g10530 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.