Mp3g10720



Description

Annotation

Database ID Description
Pfam PF00295 Glycosyl hydrolases family 28
SMART SM00710 pbh1
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:2.160.20.10:FF:000032 Pectin lyase-like superfamily protein
PANTHER PTHR31375 -
Gene3D G3DSA:2.160.20.10 -
SUPERFAMILY SSF51126 Pectin lyase-like
KEGG K01184 polygalacturonase [EC:3.2.1.15]
MapolyID Mapoly0037s0124 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGH28.1 Cell wall related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g10720.1 chr3:11117713..11122856 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g10720.2 chr3:11116407..11122856 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.