Mp3g11710



Description

Annotation

Database ID Description
Coils Coil Coil
FunFam G3DSA:1.10.220.100:FF:000001 Enhancer of mRNA-decapping protein 4
Gene3D G3DSA:1.10.220.100 -
Gene3D G3DSA:2.130.10.10 -
KEGG K12616 enhancer of mRNA-decapping protein 4
KOG KOG1916 Nuclear protein, contains WD40 repeats; [R]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR15598 ENHANCER OF MRNA-DECAPPING PROTEIN 4
Pfam PF00400 WD domain, G-beta repeat
Pfam PF21289 Enhancer of mRNA-decapping protein 4, C-terminal
SMART SM00320 WD40_4
SUPERFAMILY SSF50978 WD40 repeat-like
GO GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA
GO GO:0000932 P-body
GO GO:0005515 protein binding
MapolyID Mapoly0037s0026 -

Nomenclature

Gene symbol Product Transcript ID Status
MpEDC4 Enhancer of mRNA decapping 4 (EDC4) Published
Locus assigned by MarpolBase literature-mining curation (2026-10): Four primers in the supplementary table map to this locus; the locus is annotated KEGG K12616 (EDC4).

Associated Literature (AI-based literature mining)

Enhancer of mRNA decapping 4 (EDC4); Enhancer of mRNA decapping 4; MpEDC4 and MpDCP1 form a lineage-specific selective-autophagy receptor module that mediates P-body turnover. A point mutant MpEDC4-Y845A disrupts the function. (from nomenclature)

1 core 0 peripheral

Abdrakhmanov A, Ethier E, Anisimova AS, Grujic N, Papareddy RK, Clavel M, Karagöz GE, Hallacli E, Dagdas Y. (2026) · Developmental cell  research experimental subject
Enhancer of mRNA decapping 4; MpEDC4 and MpDCP1 form a lineage-specific selective-autophagy receptor module that mediates P-body turnover. A point mutant MpEDC4-Y845A disrupts the function.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g11710.1 chr3:12125130..12135885 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g11710.2 chr3:12125160..12135886 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g11710 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g11710 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.