Mp3g14160



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.600.10 Farnesyl Diphosphate Synthase
FunFam G3DSA:1.10.600.10:FF:000022 NADH dehydrogenase complex assembly factor 6-like protein
PANTHER PTHR21181 -
SUPERFAMILY SSF48576 Terpenoid synthases
Pfam PF00494 Squalene/phytoene synthase
KEGG K18163 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
KOG KOG4411 Phytoene/squalene synthetase; [I]
MapolyID Mapoly0004s0255 -
GO GO:0009058 biosynthetic process
GO GO:0032981 mitochondrial respiratory chain complex I assembly
GO GO:0005739 mitochondrion

Nomenclature

Gene symbol Product Transcript ID Status
MpSQS2 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Associated Literature (AI-based literature mining, Beta-version)

Secondary metabolism enzyme, Terpene biosynthesis enzymes (from nomenclature)

0 core 1 peripheral

Forestier ECF, Asprilla P, Bonter I, Romani F, Frangedakis E, Haseloff J. (2026) · Communications biology  research sequence background
Squalene synthase isoform listed among annotated genes; not experimentally characterized here.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g14160.1 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g14160.2 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g14160.3 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g14160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g14160 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.