Mp3g15180
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00850 | Histone deacetylase domain |
| Gene3D | G3DSA:3.40.800.20 | Histone deacetylase domain |
| PRINTS | PR01270 | Histone deacetylase superfamily signature |
| SUPERFAMILY | SSF52768 | Arginase/deacetylase |
| CDD | cd09993 | HDAC_classIV |
| PANTHER | PTHR10625 | HISTONE DEACETYLASE HDAC1-RELATED |
| KOG | KOG1344 | Predicted histone deacetylase; [B] |
| MapolyID | Mapoly0004s0154 | - |
| GO | GO:0016575 | obsolete histone deacetylation |
| GO | GO:0004407 | histone deacetylase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpHDAC8 | Chromatin related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g15180 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g15180.1 AAACAGTTTT CTTTCCGCAC GATATGCCTG GCTCCGTAGA AAACCCATGA AACACTGCAG CTTACTTCAA CCCGTCAAAA GACAATTACT ACTTGGAGCT TATTGGTAAA CAACGACTGT GGCCAACAGA AACCATGAAC ATTTTGATTC CAAATCCCAC TAAAGCGCGA CCTATTTTAG TAGACATAGA CGATGTATGG ATGATTCTAC ATCGGCTCGA ACTAAAGCAC AGTATCACTG AAATTAAGCG CTAGTTGTTC CAAAATTCAG TTTAGAGTGT GTGAATGTGT ATCGAACTTA GTATAATCGT TCTGAATATG GACAATCGAG GATCCTAGCT TAACACGTAG CAATTTCATC CACTAATTGG TTCCAAACCG CAATAGCACG GGATGTTATG AGTGGTCATT ACTCATCTCC ACGAATGTGA CTGGAGCTGG AGCTGGAGCT AATTCTGGGT GCAGATTTCC GCGGAACACT CCCTCACGTA CAGCAGTACT TCGCACGCGT TCGATGGTCC ATCTTGCTGA TCCCAGCTCC GCTCCACTAA TGCACGTGTC TATCATCGTG ATGTAGTGTA GCTTACCTGC AACATGGCCA TGAGATCTCT TGCTGCAATA TCCTCGTCTA TTGTTTCACT CCGAGCTGTC CATCTTCCTA CGAAGCTTCG ACCATTTGCA GGGCAAGTAC GATCAAGTGT TCAGCTCGTC CGCACCAGAG AGAATGTGAG CGCAGAAATT CTTGCTGTTC GCAATATCAG GTGGACCGGA GGCATTAAAA TTCTGAGGCC ATTTCAAACG CTATCGACGT CAGGGAACCC TTTCGACGGT ATGGAATCTG ATAAGCTCTG TTCTGGCTGT TAAGATTGAG AATTTGACCA TAATTGCCTC AGGGCCCTGG AAGGCTTTTG AATTGATTGT TTGATTTGAT TTGTTTTGAT TGTTTTGTTA TTCTGGCCTA CATCACACGA GCAGAATCCA TGTACATCCG CTCTTGAATT TAACTTTCAC TTCCTCGTTG AAATGACAAA TCTAACGGAG CTTACGAAGC AAGCTGAATT TGTGAAAAGC TCAGCTCAGG TGCAGTTTTG GTTGTACGAT CTTCACGTTA AACTTGAATA TTATATTGTT ACGACATTAG CTTAGAAGAA AGCAATCCCC GTGGGGAAAA GTAATGCGGG TGAACTCTCT TTACAGATTG ACTGTCACCA GGTTTTCTGA AATTTAAACA AAATTAGCTG AAATGCCGTC AAGATTTTGT AAGGACAAAA GTGTGGATTG TGATGGGGTT GAGTGTTTCT TCATAAGACA AGAAGGCTAC AGTTTCTGAA GGTTTGAAGA AAAATGTACG ATCAATTCAA AGGCATAGTA TGCTGTTGGA TCTACTCGTT GGGTTACCGA GTTTGACCAT CTTCATTGAT ATGAAGTTTG CTTTGTCTCC TATTTTTACC CCCGATGTTG ATTTTCCAAT TTGATCAGGT ACTACTACGA GACAACCCAT CAGATGTCTC TCTGTGGGAT CCCTGGAGCC AACAAAAAGC CCCGAATCTG GAACATTTCT TACCACGAAA GGAGCAGCTC TAGCCGCAAA GCAGATCGTA GGACTAGTTG GCTTCTATTC AGATCATTAT GTCGTGCCTC TGCCCGAGGG CCATAGATTC CCAATGGACA AGTATTGCCT TCGACCTACC TCTAATTTTT TTTATATAAT CACATATTGT TTCATCGATA AATTGGCAGT CAATCATTCT AAGAATACTC ACTTTTGCGT TTGGCTTATA GGTATAGGGC CACCAGAATC TTACTCGAGG AAGATGCTGC CATGCGGGAT ATTCTGGCTA CCTATCCCGC CCCCTTTGCT TCTCGGGAGG AGTTAAGCTT GGCACACGAT GAAAGGTAGG ACAGGTCTTG GAACAAAGGT TCATGTGTAG ATCTCTTCCT CATTTTAGTA TTTAAATTGG CTTCCGTTTG GCAAGAATGT TTTGAACTTT CGAAACTGTT CATGATATCA ACCTTCACTC AGTGATATGT AAATGGTTCG GATTATGGGT ACAAACCAAT GACGCAGCAA TTTTGATTTG TGATCAATTA CCAGTTACCT GGAAAGCCTC AGTACAGGAA ATCTGGATGC AAAACAGCAA AGAGCATTAG GTTTCCCCTG GAGTCCAGAG CTGTGGAGAC GGTCACAAGC CTCGTGTGGG TAAGTTGACT TTCTTCTATG AACACAGTCC GAGAAATGTT CGAGCCCAAG TTGATCAAAT CTCTATCAGA CAACTCTTTA TTGCAGCGGA CAGATCAGAA TATGGAGTAA CCTTATAACC GGCAAAACTC GAAAACTCTA TCGTGTTTGC AGAGGAACAG TAGCAGCAAT GCACGCTGTG ATGTTGGGAG TAGCAAGGGC TGCTGCTAAC ATAGCCGGAG GCACGCATCA TGCCTTTGCT GGTCATGGTG AAGGATTTTG TAAGTTTTCT ACTCGTTCCA AGTACTTTGA CGATCTCAGT CGATTAGTTT CGCAGGTAGA GCAAGTTTCG TGCTGGGCAT GGGCAAGCTC TTAAAAACAT CTTGCTTGCC CAAGGATTAA TGGAGATGGT CGTGTGCACA TCCTTCATGT CCTATGTAGA CTGAATAGTT TGTAATCACA TGAACTTTAA TGATGTGCAT CTGTTTGTCT GTTTTGGATT ATGTTTAACA GGTGTATATA ATGACATAGC CGTCGCAGCC TTGGTGGCTC TGAACGATTA TCCAGCGTCT TGTAATTTGC AATCTCCAAT TCTTGTCATT GATCTTGATG TACATCAGGT TTGCTTCTTA TTCATCTCTC CATCAAAAGA AGCAATCAGT TTTGGTCAGC AGTTTCATAA TTCTTTCGAA GGTAGACTGT TCATACTCAT TCCATGGTTC ATATGCTTTA CAGGGAAATG GAACAGCGAA AATTTTTGAA AATGATGACA GAGTTATTAC TTTCAGCATG CATGGCGAGA AAAACTATCC TTGGCGCACG AAGATGAAAT CAAATTATGA TGTTGATTTA CCAGATGATA CTGGTGATGA GGAATATCTC ACAATATTGA ATGAACAACT GGCGATGTTA TTTGACCGAC ACAAACCATT TCTGATTTTT TTTCAGGTAA CCACTTTCAT GACCGAGTAT AATTCTCAAT TAATGTTTAG ATTGTTCAAG GTTTTTCAAC TGGATATTAC TTACCCAGAT CCTGCCTTAA TTATCTCGCT CCTCTGGTTT CTGGATCCTG AAGTTGTGTT AATGACTGTT ATTTCAATTG ACCCATGACA CTTGTCTTCA GGGAGATTCA GTATAGATCA AACGGGGTAA CAAATTAATT AAGAATCATG CTTTTTTTAT TCACATCCAG CCTTTTGATG ATTCTGACAT TTCGTTATTT CTGCCAAACT GTACAAATGG ACTTTGTACA TCGACTCAAT CTGATCACTG GCAGTTGCAA TTGCAGGCTG GAGTCGATGC TCTTAAAGAG GACAGTTTTG GCAGATTATC TCTAACGAGG TGATTATTTT CACCAGTGGC TGTCTTGAGT ATGAGATAAG CAACCGGTGT GTGATTTTTG CAGGCATTTA GGTAGATTAG CTTAGTTATA ACTACGTGCA GTCAAATGCA CTCAAACGTC TCGGGTGCAG GAAAATCTCA AGCTTACTTT GCTGTGCAGA CAAGGGCTGT TGAGGAGGAA CAACATTATT TACAGTGCCT GCCAGACCAG AAATTTGCCC TTGGTAATAA CGATGGGTGG AGGCTATTCT CGTCCGAATG ATGGTGGGTG ATAAACAATC CCAATGCTTA ATCACTTATT TACCCCGTGT ACTGCTCAGA GGTTACACTT ATGTGGTTAG TGCACTGATG ACTGATTTAC AAAGCCTAGA TTGTTATAAA AAGCGGAATG AGCAGTTTGT AGGCTGATGC AGGCTTAGAC TGAATGTCAA GCTTGTGACC GTGGTCTGTT TTACAGTTAA TCTGGTATGT GAAAATTCAA ACTTCCAAGG ATGAGACATC TAAGTTTGTG TAGTGTTCTG TTCGCAGCAT CTATCGAAGC GCACGCCGAT GTTTATCGAT CAGCAGCTCT GAGATATGGT GCTGCTCGGA GTTGAATTCT TTGATTTAGC AAACATTCTG AAGGACAGAA GGATTGTGTT ACTCCAGGGA AACAAACAAA TATCGTATGC GAAAGTTCTG GAACATCTCT CCCTTTAAAT ACTCAATATC AAGCACTTCG TCTTCCAAAA GACCTCACTA TTGGCGCAAT GTGGTCTTAG GCCTGCCATG AACG |
mRNA UTR + CDS |
| >Mp3g15180.1 AAACAGTTTT CTTTCCGCAC GATATGCCTG GCTCCGTAGA AAACCCATGA AACACTGCAG CTTACTTCAA CCCGTCAAAA GACAATTACT ACTTGGAGCT TATTGGTAAA CAACGACTGT GGCCAACAGA AACCATGAAC ATTTTGATTC CAAATCCCAC TAAAGCGCGA CCTATTTTAG TAGACATAGA CGATGTATGG ATGATTCTAC ATCGGCTCGA ACTAAAGCAC AGTATCACTG AAATTAAGCG CTAGTTGTTC CAAAATTCAG TTTAGAGTGT GTGAATGTGT ATCGAACTTA GTATAATCGT TCTGAATATG GACAATCGAG GATCCTAGCT TAACACGTAG CAATTTCATC CACTAATTGG TTCCAAACCG CAATAGCACG GGATGTTATG AGTGGTCATT ACTCATCTCC ACGAATGTGA CTGGAGCTGG AGCTGGAGCT AATTCTGGGT GCAGATTTCC GCGGAACACT CCCTCACGTA CAGCAGTACT TCGCACGCGT TCGATGGTCC ATCTTGCTGA TCCCAGCTCC GCTCCACTAA TGCACGTGTC TATCATCGTG ATGTAGTGTA GCTTACCTGC AACATGGCCA TGAGATCTCT TGCTGCAATA TCCTCGTCTA TTGTTTCACT CCGAGCTGTC CATCTTCCTA CGAAGCTTCG ACCATTTGCA GGGCAAGTAC GATCAAGTGT TCAGCTCGTC CGCACCAGAG AGAATGTGAG CGCAGAAATT CTTGCTGTTC GCAATATCAG GTGGACCGGA GGCATTAAAA TTCTGAGGCC ATTTCAAACG CTATCGACGT CAGGGAACCC TTTCGACGGT ACTACTACGA GACAACCCAT CAGATGTCTC TCTGTGGGAT CCCTGGAGCC AACAAAAAGC CCCGAATCTG GAACATTTCT TACCACGAAA GGAGCAGCTC TAGCCGCAAA GCAGATCGTA GGACTAGTTG GCTTCTATTC AGATCATTAT GTCGTGCCTC TGCCCGAGGG CCATAGATTC CCAATGGACA AGTATAGGGC CACCAGAATC TTACTCGAGG AAGATGCTGC CATGCGGGAT ATTCTGGCTA CCTATCCCGC CCCCTTTGCT TCTCGGGAGG AGTTAAGCTT GGCACACGAT GAAAGTTACC TGGAAAGCCT CAGTACAGGA AATCTGGATG CAAAACAGCA AAGAGCATTA GGTTTCCCCT GGAGTCCAGA GCTGTGGAGA CGGTCACAAG CCTCGTGTGG AGGAACAGTA GCAGCAATGC ACGCTGTGAT GTTGGGAGTA GCAAGGGCTG CTGCTAACAT AGCCGGAGGC ACGCATCATG CCTTTGCTGG TCATGGTGAA GGATTTTGTG TATATAATGA CATAGCCGTC GCAGCCTTGG TGGCTCTGAA CGATTATCCA GCGTCTTGTA ATTTGCAATC TCCAATTCTT GTCATTGATC TTGATGTACA TCAGGGAAAT GGAACAGCGA AAATTTTTGA AAATGATGAC AGAGTTATTA CTTTCAGCAT GCATGGCGAG AAAAACTATC CTTGGCGCAC GAAGATGAAA TCAAATTATG ATGTTGATTT ACCAGATGAT ACTGGTGATG AGGAATATCT CACAATATTG AATGAACAAC TGGCGATGTT ATTTGACCGA CACAAACCAT TTCTGATTTT TTTTCAGGCT GGAGTCGATG CTCTTAAAGA GGACAGTTTT GGCAGATTAT CTCTAACGAG ACAAGGGCTG TTGAGGAGGA ACAACATTAT TTACAGTGCC TGCCAGACCA GAAATTTGCC CTTGGTAATA ACGATGGGTG GAGGCTATTC TCGTCCGAAT GATGCATCTA TCGAAGCGCA CGCCGATGTT TATCGATCAG CAGCTCTGAG ATATGGTGCT GCTCGGAGTT GAATTCTTTG ATTTAGCAAA CATTCTGAAG GACAGAAGGA TTGTGTTACT CCAGGGAAAC AAACAAATAT CGTATGCGAA AGTTCTGGAA CATCTCTCCC TTTAAATACT CAATATCAAG CACTTCGTCT TCCAAAAGAC CTCACTATTG GCGCAATGTG GTCTTAGGCC TGCCATGAAC G |
CDS |
| >Mp3g15180.1 ATGGCCATGA GATCTCTTGC TGCAATATCC TCGTCTATTG TTTCACTCCG AGCTGTCCAT CTTCCTACGA AGCTTCGACC ATTTGCAGGG CAAGTACGAT CAAGTGTTCA GCTCGTCCGC ACCAGAGAGA ATGTGAGCGC AGAAATTCTT GCTGTTCGCA ATATCAGGTG GACCGGAGGC ATTAAAATTC TGAGGCCATT TCAAACGCTA TCGACGTCAG GGAACCCTTT CGACGGTACT ACTACGAGAC AACCCATCAG ATGTCTCTCT GTGGGATCCC TGGAGCCAAC AAAAAGCCCC GAATCTGGAA CATTTCTTAC CACGAAAGGA GCAGCTCTAG CCGCAAAGCA GATCGTAGGA CTAGTTGGCT TCTATTCAGA TCATTATGTC GTGCCTCTGC CCGAGGGCCA TAGATTCCCA ATGGACAAGT ATAGGGCCAC CAGAATCTTA CTCGAGGAAG ATGCTGCCAT GCGGGATATT CTGGCTACCT ATCCCGCCCC CTTTGCTTCT CGGGAGGAGT TAAGCTTGGC ACACGATGAA AGTTACCTGG AAAGCCTCAG TACAGGAAAT CTGGATGCAA AACAGCAAAG AGCATTAGGT TTCCCCTGGA GTCCAGAGCT GTGGAGACGG TCACAAGCCT CGTGTGGAGG AACAGTAGCA GCAATGCACG CTGTGATGTT GGGAGTAGCA AGGGCTGCTG CTAACATAGC CGGAGGCACG CATCATGCCT TTGCTGGTCA TGGTGAAGGA TTTTGTGTAT ATAATGACAT AGCCGTCGCA GCCTTGGTGG CTCTGAACGA TTATCCAGCG TCTTGTAATT TGCAATCTCC AATTCTTGTC ATTGATCTTG ATGTACATCA GGGAAATGGA ACAGCGAAAA TTTTTGAAAA TGATGACAGA GTTATTACTT TCAGCATGCA TGGCGAGAAA AACTATCCTT GGCGCACGAA GATGAAATCA AATTATGATG TTGATTTACC AGATGATACT GGTGATGAGG AATATCTCAC AATATTGAAT GAACAACTGG CGATGTTATT TGACCGACAC AAACCATTTC TGATTTTTTT TCAGGCTGGA GTCGATGCTC TTAAAGAGGA CAGTTTTGGC AGATTATCTC TAACGAGACA AGGGCTGTTG AGGAGGAACA ACATTATTTA CAGTGCCTGC CAGACCAGAA ATTTGCCCTT GGTAATAACG ATGGGTGGAG GCTATTCTCG TCCGAATGAT GCATCTATCG AAGCGCACGC CGATGTTTAT CGATCAGCAG CTCTGAGATA TGGTGCTGCT CGGAGTTGA |
Protein |
| >Mp3g15180.1 MAMRSLAAIS SSIVSLRAVH LPTKLRPFAG QVRSSVQLVR TRENVSAEIL AVRNIRWTGG IKILRPFQTL STSGNPFDGT TTRQPIRCLS VGSLEPTKSP ESGTFLTTKG AALAAKQIVG LVGFYSDHYV VPLPEGHRFP MDKYRATRIL LEEDAAMRDI LATYPAPFAS REELSLAHDE SYLESLSTGN LDAKQQRALG FPWSPELWRR SQASCGGTVA AMHAVMLGVA RAAANIAGGT HHAFAGHGEG FCVYNDIAVA ALVALNDYPA SCNLQSPILV IDLDVHQGNG TAKIFENDDR VITFSMHGEK NYPWRTKMKS NYDVDLPDDT GDEEYLTILN EQLAMLFDRH KPFLIFFQAG VDALKEDSFG RLSLTRQGLL RRNNIIYSAC QTRNLPLVIT MGGGYSRPND ASIEAHADVY RSAALRYGAA RS |