Mp3g16010



Description

Annotation

Database ID Description
Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase
PANTHER PTHR21404 HEN1
SUPERFAMILY SSF54768 dsRNA-binding domain-like
CDD cd02440 AdoMet_MTases
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF18441 Hen1 La-motif C-terminal domain
Pfam PF21224 Small RNA 2'-O-methyltransferase-like, La-motif-containing domain
Pfam PF08242 Methyltransferase domain
Pfam PF17842 Double-stranded RNA binding domain 2
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
ProSiteProfiles PS50137 Double stranded RNA-binding domain (dsRBD) profile.
Gene3D G3DSA:3.10.50.40 -
Coils Coil Coil
Gene3D G3DSA:3.30.160.20 -
SMART SM00358 DRBM_3
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
SUPERFAMILY SSF54534 FKBP-like
KEGG K20798 small RNA 2'-O-methyltransferase [EC:2.1.1.386]
KOG KOG1045 Uncharacterized conserved protein HEN1/CORYMBOSA2; C-term missing; [S]
KOG KOG1045 Uncharacterized conserved protein HEN1/CORYMBOSA2; [S]
MapolyID Mapoly0004s0071 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHEN1 miRNA biogenesis protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g16010.1 chr3:16483115..16490106 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.