Mp3g18220



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:6.10.140.1430 -
Coils Coil Coil
Gene3D G3DSA:1.20.120.20 Apolipoprotein
PANTHER PTHR47372 DAUER UP-REGULATED-RELATED
KOG KOG4744 Uncharacterized conserved protein; [S]
KOG KOG0994 Extracellular matrix glycoprotein Laminin subunit beta; N-term missing; [W]
MapolyID Mapoly0140s0019 -

Nomenclature

Gene symbol Product Transcript ID Status
MpLEA-like15 Late-embryogenesis abundant protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g18220.1 chr3:19604583..19610187 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g18220 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g18220 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.