Mp3g18500
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SFLD | SFLDG01020 | Terpene Cyclase Like 2 |
| Coils | Coil | Coil |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| Pfam | PF19086 | Terpene synthase family 2, C-terminal metal binding |
| PANTHER | PTHR35201 | TERPENE SYNTHASE |
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| SFLD | SFLDS00005 | Isoprenoid Synthase Type I |
| MapolyID | Mapoly0142s0043 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMTPSL2 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Functionally characterized as a limonene synthase with unusual preference for neryl diphosphate (NPP) over GPP (~25-fold; 108.1 pmol/h/ug). Expression higher in early development, correlating with limonene accumulation.
1 core 1 peripheral
Kumar, S., et al. (2016)
· Plant Cell research experimental subject
Functionally characterized as a limonene synthase with unusual preference for neryl diphosphate (NPP) over GPP (~25-fold; 108.1 pmol/h/ug). Expression higher in early development, correlating with limonene accumulation.
Kawamura, S., et al. (2022)
· Plant & Cell Physiology research citation background
Microbial-type TPS-like enzyme in the limonene biosynthesis pathway; recovered as highly co-expressed with oil body marker genes in the demonstration analysis.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g18500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g18500.1 TTGAGTATCT CTTGCGATCT GTTCGTCTGT GGATTGGGGA AAGTGTTCTT CACTCGGTCA CTTCCCTTCA CATACGCGAT GGCGGCAAAA GCTCACAGGA GTTTCTCCAA GCTTATGAGT GTGAATTCGA GGTTCTTGTC CAGGAAAAGC GAGGGCCAGA ATGTCGCAGT GAAAGTGCCG ATGCAGAATA ATGTAGCATC CAAGGATCGA GTGGTCGCCT TTTATGGCAG AGCAGCGTCA CAGGCAAGGA GCCACCAAAT TCAATCAGCA GCTTCATCAC CTCAGCTGCC AGTTCCTCAG AAGGAGGAAA ACCAAGTACC CGATTTCACT CATCTCTATG AGGACCGTGG ACTGAATCCT CTGATAGCCG AGTTCAATGA AAAGGCCCAC GATTGGCTTG TCACGCACGA TGTCCACACT CAGATGGGCC CGGAGGGATG GAAGGAATTC AAGTCAGGAA GAACCCCGTA TTTGGTGGGT GAAGTGTACC ACGACGTTGA TCGGAAGGAC TTTCTTTGGT GTGCCAAGTT TATAGCTTGG ATTTCCTGTC TTGATGATTT TTGCGACAAG CTTGAAATCT GGAGCGACAT GAATAAAACC ATCGGTCTCA TCCTCGAAAC GCAGAAGGTT ATCTTGTGGT TCTGCTCTGA GGACCCTCGT CTCCTCCGAA ACTTGGAGAT GGTGTTCGAT TGTATCCCCA CCGACCAACG TGACGATGTC TTTAGTGCAT TTGCGGATTC CCTCGCCTAC GCCCGCACCA GCTCTCGCGC AGGTGTTTCA TTGATCTTAG TTCATGGGCT AGTCTCGCGT ACACCTCCAC GCAGTCTTTG TGTTATTTAA ATTTAAACGA GTTATCCAGG TCTGCATTCT GATAGCTATG GATCTCAAAA CGATGACATC GTAAACTCTG ACATAACTAT CAATTCTGAA GCTGTCAATT AGTAGAAGTG GAGGTTAATA TGTTATTCAT TTCAGCTCTT CGACCTCTAA TATTTTTTCA ATGGTTGTTG CAGGACTGAT GAGTTTAGAT TTGCAGCCTT TAGCATCAGC TCTCAGAGAA TTATTAATTG AGTACTGTGA ACGCCTGCCA TATGACTGCA ATGTCAGAAT GGCCCAATAT ATACAGAATT ATGCATTGAC AATTGTTACT GAGACGAAGA GCAGATTATC CGCAGAGTAT CATACTTCAG TGGCTGAATT CACCGACTTT CGAACGCGAT CCATTGGCGT GCAGCCCCTG ATAGTAAGCT TTCTTTTTCA TTACGTCACG ATTGCTTGCA GAATCGCGAC CATGACATCC TAGACTCCAT GTCCTCTGCT TGCAAGAACG TGCTCACGTT ATGAGCATCG ATTGGCTGAA TCGGGATCTG TCAGTCATGA CGCGAAGGGA CTTGTTGGTC TTAACTTCTG TCATATTTAA GGCTTGATTA CTGCCATACG AGACTTTGGT TCTTGACTTT AGTTTAGACT CTGGTTTAGC AGAATGAGCT GTAAACAATT GTCAACACGT TGCTGAAAGC TGCTGAAATG CATTCAAAGA GTTCGACCAC GTTGTGCATT TAGTATCATC TCAAGGTCCA CAGTAGGTTC TCAGCAGTCT TACGAGTTCA ACCTTGTGCA GGGTTTGACG GATCTCTTCA TCGATTCTCG ACGGTGGCCC CAAATTCCGA AGGATGTGTT TGTCGATACA AACGTGCAAG CCCTCGTGGA CGCTTCCTGC CGTGCCGTAG CATGGGACAA CGATATGTCC TCATTTTCAA AGGTAAGAGG AAAATTTCCG CTGACAGTGC CATAGACATA ACAATATCAC AAGAGTCCTA TTATCAAGAT TGTGTTTAGG CGAGTAGCTC CAGTCATTAG TGACGTGTAC CCCTTGGTTC CAATGTCTGT CGAGCTTTCC AGAAGTCCGT AGCAGCACTT TTATTTTGGT CCATTTCCAA ATTAACTGTG AAAGTCTTTA TTTTGAAATT CTTTTCCAAA GTCTCCTGTG GTTTTTCTTT TAGCGCTAAT TCAGTTTAAT GTGAGCAAGG GATTGGTCAC GGGCACCTAG GTCAGTATTG TCTCCAGAGG TAGGAAACAA AAAAGACTGC AATGGAATAT TGAGAACTAG AACTTGATCT TTCTGGGGCA CAGTCTTACA AAGGCTTTAT GAGTGCCTTA GGAGGTTCAA GAGCGAGGAG ATCGTTTCAA TGTGATCTTC ATCATCATGG AAGAATGCGG ATGTTCGCAA ATCGAAGCTA TGAATCGCGC GAAGGAAATG TTTCAAAACG AGATCAATGA GTTCGAGACA AGAGTGGCAA ACTTGAAGGT TGAACCTCAG TATCAGAATG CTGTGGCAGA GTACGTGAGA ATATGCAGAC TCATTATTCT AGGCATCCCA CGATGGCATC GTAAGTCACA AAGATACCAA AAAGAGGACC ACTACTTGAG ATAAAGAGTC ATCTATCGGC TAGAGCTTTT GTCATATATC AAGTCAGCTC TTAAGGAGCC GACTGATGGT CAAGTCAGTA TTATCGCTCA TATCTTATAT AAGAATAAAG GTTTGTAACT ATGATTTC |
mRNA UTR + CDS |
| >Mp3g18500.1 TTGAGTATCT CTTGCGATCT GTTCGTCTGT GGATTGGGGA AAGTGTTCTT CACTCGGTCA CTTCCCTTCA CATACGCGAT GGCGGCAAAA GCTCACAGGA GTTTCTCCAA GCTTATGAGT GTGAATTCGA GGTTCTTGTC CAGGAAAAGC GAGGGCCAGA ATGTCGCAGT GAAAGTGCCG ATGCAGAATA ATGTAGCATC CAAGGATCGA GTGGTCGCCT TTTATGGCAG AGCAGCGTCA CAGGCAAGGA GCCACCAAAT TCAATCAGCA GCTTCATCAC CTCAGCTGCC AGTTCCTCAG AAGGAGGAAA ACCAAGTACC CGATTTCACT CATCTCTATG AGGACCGTGG ACTGAATCCT CTGATAGCCG AGTTCAATGA AAAGGCCCAC GATTGGCTTG TCACGCACGA TGTCCACACT CAGATGGGCC CGGAGGGATG GAAGGAATTC AAGTCAGGAA GAACCCCGTA TTTGGTGGGT GAAGTGTACC ACGACGTTGA TCGGAAGGAC TTTCTTTGGT GTGCCAAGTT TATAGCTTGG ATTTCCTGTC TTGATGATTT TTGCGACAAG CTTGAAATCT GGAGCGACAT GAATAAAACC ATCGGTCTCA TCCTCGAAAC GCAGAAGGTT ATCTTGTGGT TCTGCTCTGA GGACCCTCGT CTCCTCCGAA ACTTGGAGAT GGTGTTCGAT TGTATCCCCA CCGACCAACG TGACGATGTC TTTAGTGCAT TTGCGGATTC CCTCGCCTAC GCCCGCACCA GCTCTCGCGC AGGACTGATG AGTTTAGATT TGCAGCCTTT AGCATCAGCT CTCAGAGAAT TATTAATTGA GTACTGTGAA CGCCTGCCAT ATGACTGCAA TGTCAGAATG GCCCAATATA TACAGAATTA TGCATTGACA ATTGTTACTG AGACGAAGAG CAGATTATCC GCAGAGTATC ATACTTCAGT GGCTGAATTC ACCGACTTTC GAACGCGATC CATTGGCGTG CAGCCCCTGA TAGGTTTGAC GGATCTCTTC ATCGATTCTC GACGGTGGCC CCAAATTCCG AAGGATGTGT TTGTCGATAC AAACGTGCAA GCCCTCGTGG ACGCTTCCTG CCGTGCCGTA GCATGGGACA ACGATATGTC CTCATTTTCA AAGGAGGTTC AAGAGCGAGG AGATCGTTTC AATGTGATCT TCATCATCAT GGAAGAATGC GGATGTTCGC AAATCGAAGC TATGAATCGC GCGAAGGAAA TGTTTCAAAA CGAGATCAAT GAGTTCGAGA CAAGAGTGGC AAACTTGAAG GTTGAACCTC AGTATCAGAA TGCTGTGGCA GAGTACGTGA GAATATGCAG ACTCATTATT CTAGGCATCC CACGATGGCA TCGTAAGTCA CAAAGATACC AAAAAGAGGA CCACTACTTG AGATAAAGAG TCATCTATCG GCTAGAGCTT TTGTCATATA TCAAGTCAGC TCTTAAGGAG CCGACTGATG GTCAAGTCAG TATTATCGCT CATATCTTAT ATAAGAATAA AGGTTTGTAA CTATGATTTC |
CDS |
| >Mp3g18500.1 ATGGCGGCAA AAGCTCACAG GAGTTTCTCC AAGCTTATGA GTGTGAATTC GAGGTTCTTG TCCAGGAAAA GCGAGGGCCA GAATGTCGCA GTGAAAGTGC CGATGCAGAA TAATGTAGCA TCCAAGGATC GAGTGGTCGC CTTTTATGGC AGAGCAGCGT CACAGGCAAG GAGCCACCAA ATTCAATCAG CAGCTTCATC ACCTCAGCTG CCAGTTCCTC AGAAGGAGGA AAACCAAGTA CCCGATTTCA CTCATCTCTA TGAGGACCGT GGACTGAATC CTCTGATAGC CGAGTTCAAT GAAAAGGCCC ACGATTGGCT TGTCACGCAC GATGTCCACA CTCAGATGGG CCCGGAGGGA TGGAAGGAAT TCAAGTCAGG AAGAACCCCG TATTTGGTGG GTGAAGTGTA CCACGACGTT GATCGGAAGG ACTTTCTTTG GTGTGCCAAG TTTATAGCTT GGATTTCCTG TCTTGATGAT TTTTGCGACA AGCTTGAAAT CTGGAGCGAC ATGAATAAAA CCATCGGTCT CATCCTCGAA ACGCAGAAGG TTATCTTGTG GTTCTGCTCT GAGGACCCTC GTCTCCTCCG AAACTTGGAG ATGGTGTTCG ATTGTATCCC CACCGACCAA CGTGACGATG TCTTTAGTGC ATTTGCGGAT TCCCTCGCCT ACGCCCGCAC CAGCTCTCGC GCAGGACTGA TGAGTTTAGA TTTGCAGCCT TTAGCATCAG CTCTCAGAGA ATTATTAATT GAGTACTGTG AACGCCTGCC ATATGACTGC AATGTCAGAA TGGCCCAATA TATACAGAAT TATGCATTGA CAATTGTTAC TGAGACGAAG AGCAGATTAT CCGCAGAGTA TCATACTTCA GTGGCTGAAT TCACCGACTT TCGAACGCGA TCCATTGGCG TGCAGCCCCT GATAGGTTTG ACGGATCTCT TCATCGATTC TCGACGGTGG CCCCAAATTC CGAAGGATGT GTTTGTCGAT ACAAACGTGC AAGCCCTCGT GGACGCTTCC TGCCGTGCCG TAGCATGGGA CAACGATATG TCCTCATTTT CAAAGGAGGT TCAAGAGCGA GGAGATCGTT TCAATGTGAT CTTCATCATC ATGGAAGAAT GCGGATGTTC GCAAATCGAA GCTATGAATC GCGCGAAGGA AATGTTTCAA AACGAGATCA ATGAGTTCGA GACAAGAGTG GCAAACTTGA AGGTTGAACC TCAGTATCAG AATGCTGTGG CAGAGTACGT GAGAATATGC AGACTCATTA TTCTAGGCAT CCCACGATGG CATCGTAAGT CACAAAGATA CCAAAAAGAG GACCACTACT TGAGATAA |
Protein |
| >Mp3g18500.1 MAAKAHRSFS KLMSVNSRFL SRKSEGQNVA VKVPMQNNVA SKDRVVAFYG RAASQARSHQ IQSAASSPQL PVPQKEENQV PDFTHLYEDR GLNPLIAEFN EKAHDWLVTH DVHTQMGPEG WKEFKSGRTP YLVGEVYHDV DRKDFLWCAK FIAWISCLDD FCDKLEIWSD MNKTIGLILE TQKVILWFCS EDPRLLRNLE MVFDCIPTDQ RDDVFSAFAD SLAYARTSSR AGLMSLDLQP LASALRELLI EYCERLPYDC NVRMAQYIQN YALTIVTETK SRLSAEYHTS VAEFTDFRTR SIGVQPLIGL TDLFIDSRRW PQIPKDVFVD TNVQALVDAS CRAVAWDNDM SSFSKEVQER GDRFNVIFII MEECGCSQIE AMNRAKEMFQ NEINEFETRV ANLKVEPQYQ NAVAEYVRIC RLIILGIPRW HRKSQRYQKE DHYLR |