Mp3g19580
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF01936 | NYN domain |
| Gene3D | G3DSA:3.40.50.1010 | - |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. |
| PANTHER | PTHR35744 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| SMART | SM00355 | c2h2final6 |
| CDD | cd18725 | PIN_LabA-like |
| KOG | KOG1074 | Transcriptional repressor SALM; N-term missing; C-term missing; [K] |
| MapolyID | Mapoly0049s0076 | - |
| GO | GO:0004540 | RNA nuclease activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC2H2-19 | transcription factor, C2H2-ZnF | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g19580 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g19580.1 TCGCGCAAGA CGCCGTGCTC GACGAGAGCG AGTGCGTGAG TGATTACGAA TCGCAGCCTC GATATTTGGC AGGGTTTAGT GTACAGTTAC TGAGGTTTTG GAGCTTCGGT GTTATGAGTT ATGAGTCCTG CTGGAGGTCA TGAACGAAGA GTATTGCAGG TCTCAGGGAT CGAGGGTGCA CCGAAAGCGG CCGAAGCTTT ATTGGAGAGA GTGCGAGCTG GACCTGGAGC CGGACGTCGA GAGCTTCATC TCGCTGTTGT AGACACGGTG GTGGTGGTGC TGCTTTAACT ACTGGTAGCA CGTCGCACGA GGGACAAAGG TTCTGCGATT CCCCGTGATT GCTCCGTCCC ACGTTATGGT GCCAAAGGCA GAAGTGTGGA TTGCTCTTCC ATAGCTTGTC TGTTGGTTCT CAATGCCAAA TGGACCCGGT TTTCTACGCT GTCTTAGGTT GTTAGGGTTT GCATTAGTCT TCCTGTCAGC TTGCCCATCG CAGTCGCAGA GGGGAGCGGG GGTTTGAGCT TTTCATGTAA GATCGCGAGT ATGGAATTTC TCGTATGCTC GGCCACATTT AGGACTCTCC TCATCCTCTC ATGATGGGTT TGGTTCAGAT ACACAATTGA CTGATCGAGG AGCTCGGACC ATTTGACCTC ATCTCGTGAT GCCGTCGGTA GCTATGGGGT TGACTTTTAC GGGCCCCTTC AATTTTCACT CCAGGCTTTG GAGGTATCGC ATTGATGTGT CTCACGCATC TGCAGTCAAA TTACACTATG GAAACGGTGG ATTTCCCCGG CTTAGAGGGA GGGGAAGTCC GGGATCCTGG GTTCGTTGCG GACTGGAAGC AGGCGGAATG GCGAGAGAGG AGGAGGAGGA GGTTGTTCAC GAGCAAGGAA TCTCTAGAAG AACAGTCGCT GTTTTCTGGG ATCTTGATAA CAAGCCTCCG AATACTGTGC CTCCTTATGA TGCAGCTCTG AGATTGAAGA CTTTAGCTGG TGAGTTAGGG GAAGTCGTGG ATATGGTTGC ATATGCCAAC AGGAACGCAT TCACTCATGT ACCTGCGAGG GTCCGGGAGG AAAGGCACGA TAGAAAACTT TTGGACCAGC TCGAGAGAAG GGGTCTGGTG GAGGTGGAAC AGCCTTACAT CTGTTCCATG TGCGGGAGAA AATGTAAAAC AAATTATGCT TTGAAGAAGC ATTTCAAGCA GCTACACGAA AGAGAGCGGC AGAAGAGGAT GAATCATCTA GATACTCTGA AAGGCAAGAA GCGAGTCAAA TTTCTAGGGA AGGTTGTAGA AAAGGAAGTC AAATACAAGG AAGCAGCTAG AACGATTATT GTACCCAAGG TTGGGTACGG TTTAGCAACG GAGTTGAAAA GAGCTGGAGT GATGGTGAGA ACGGTGGAGA GCAGGCCTCA GGCTGCCGAT GAGGCCCTTA TCCAGCATAT GACTTTGTAC ATTAACAGGG GCCTAGATTG CCTCTTTTTG GTATCAGATG ATTCAGACTT CCTAGAAATT CTTAGATACG CCAAAAGTAG AAGGCTGTAC ACTGTTGTTA TTGGGGACAC TCACATTTTG AGAAGGGCAG CAGATGCCAG TTTCCTGTGG GAAGACGTCG CTTCTGGCAA AGCCCTGCAA ACTGCCAGGG ATACTTTCCA AAGGTGGGTC GCTGAAGATG TTTTACGAGA GGAGTTGCAG AACCAGTATG AAGATGAAGA AGATGGAGTT TGGTATTCCG ATTCTGAGGA TGGGTATCTG TATGAAGACG GGGACGCCGA CGCGTATTAT GAAAACGATG CCAACGAGGA AGATTATGAT TCCGAATCTA GTGGTGAAGA AGAATATCAG AGTAGTTTTT CGCCGTCGCA AGGCAAATCC CTTTAGTGAT TTGAAGCGAC TTGTTCTGCT GCTCCCGTTT CTGCCCTGGT CTACCTTCCC TCTCGAGAAT CCAAGTGGTT ACCGACTCAT GTCACTGGAT TGCCGCTATC ATGTTTTGAT TGATGGGCGG GGAAGATAGA CATTATGCGC TCCAGTGTCA ACGCTTAACG AGTCTCGAGC ATAAGTACAA GATGGCAAAT CGAGATAGCT CCGCAATTTT TTGTCTCTTT CGAATAGAAC GGATGAAAGA TGACTAAGAT GTCTGAGGTG ATTGGAAACA GGAGCTGAGA TCAGGAAAAG CAGGTTTAGT GCTACATATC CAGCACATGC ATTTGTACAA CAATAGTTTT CAGGATGTAA AGAACGTAAT GGTAGAGATG ACTTGCAAAC CGCTCATCTT CTTTCTGGTT GTTTTCCTGT TATTGTCTGT CCCTTGCCCT GGACCCTGGA AAGCAGAGAC TACTGTCTGA CAACTTCTAC AAGTTGGGTT TGCAAGCGGA AGCGGACAAC TTTTTGACGT ATGGCTTGAG TGTGATAACT CAGATCTGCT AAGCGGAGAG ATGACCAGAG TTCACCCATA CACGAGTTTA AAATACCTTA CAAGTCTTCA CCGGTTTAAT GGGAGGTAGA CAAGAGGATT TGTTGGAGGT TGGGCTTGAA CGTACCTTGT CACAGTTGCC GCTTCGAAAA GCATTGGGAC TCGCATACAT GGCAGCACCA GAGCAGAGTG TACACTCTCC GAGGGCATTA CACAGGTGTC AACCGAGGAG CTATTTAGAA AATAGAGGGC CCTGTCTTTG GAAAGAAGAT TCTTGTTGAT ATTGTTGAGA CTGAGTCTGG TTATAATGAC GCCCAGTTCT CGAGGAAGGG AGAAAAATCC TGGAGTTTCA GCCGAAATGA AAATTCTCAT GTTGTGGAGG AAGTAAACTA GTGCAGCTAA CTTGATTGTA CATGTGTGCA ATATGTCTTG ACAACGTAGG GAATGAAAAG AAACGAAACA TAGTACAGTA CTCCACTTGC GTACCACGTG TTGGTGCGAG CACCGAATAT TCTTTGTAAT TCTATCAACC GTCTATTATT CGTCTTGCTA AAATATTTTT TTCACCAGTT AATCGTC |
mRNA UTR + CDS |
| >Mp3g19580.1 TCGCGCAAGA CGCCGTGCTC GACGAGAGCG AGTGCGTGAG TGATTACGAA TCGCAGCCTC GATATTTGGC AGGGTTTAGT GTACAGTTAC TGAGGTTTTG GAGCTTCGGT GTTATGAGTT ATGAGTCCTG CTGGAGGTCA TGAACGAAGA GTATTGCAGG TCTCAGGGAT CGAGGGTGCA CCGAAAGCGG CCGAAGCTTT ATTGGAGAGA GTGCGAGCTG GACCTGGAGC CGGACGTCGA GAGCTTCATC TCGCTGTTGT AGACACGGTG GTGGTGGTGC TGCTTTAACT ACTGGTAGCA CGTCGCACGA GGGACAAAGA TACACAATTG ACTGATCGAG GAGCTCGGAC CATTTGACCT CATCTCGTGA TGCCGTCGGT AGCTATGGGG TTGACTTTTA CGGGCCCCTT CAATTTTCAC TCCAGGCTTT GGAGGTATCG CATTGATGTG TCTCACGCAT CTGCAGTCAA ATTACACTAT GGAAACGGTG GATTTCCCCG GCTTAGAGGG AGGGGAAGTC CGGGATCCTG GGTTCGTTGC GGACTGGAAG CAGGCGGAAT GGCGAGAGAG GAGGAGGAGG AGGTTGTTCA CGAGCAAGGA ATCTCTAGAA GAACAGTCGC TGTTTTCTGG GATCTTGATA ACAAGCCTCC GAATACTGTG CCTCCTTATG ATGCAGCTCT GAGATTGAAG ACTTTAGCTG GTGAGTTAGG GGAAGTCGTG GATATGGTTG CATATGCCAA CAGGAACGCA TTCACTCATG TACCTGCGAG GGTCCGGGAG GAAAGGCACG ATAGAAAACT TTTGGACCAG CTCGAGAGAA GGGGTCTGGT GGAGGTGGAA CAGCCTTACA TCTGTTCCAT GTGCGGGAGA AAATGTAAAA CAAATTATGC TTTGAAGAAG CATTTCAAGC AGCTACACGA AAGAGAGCGG CAGAAGAGGA TGAATCATCT AGATACTCTG AAAGGCAAGA AGCGAGTCAA ATTTCTAGGG AAGGTTGTAG AAAAGGAAGT CAAATACAAG GAAGCAGCTA GAACGATTAT TGTACCCAAG GTTGGGTACG GTTTAGCAAC GGAGTTGAAA AGAGCTGGAG TGATGGTGAG AACGGTGGAG AGCAGGCCTC AGGCTGCCGA TGAGGCCCTT ATCCAGCATA TGACTTTGTA CATTAACAGG GGCCTAGATT GCCTCTTTTT GGTATCAGAT GATTCAGACT TCCTAGAAAT TCTTAGATAC GCCAAAAGTA GAAGGCTGTA CACTGTTGTT ATTGGGGACA CTCACATTTT GAGAAGGGCA GCAGATGCCA GTTTCCTGTG GGAAGACGTC GCTTCTGGCA AAGCCCTGCA AACTGCCAGG GATACTTTCC AAAGGTGGGT CGCTGAAGAT GTTTTACGAG AGGAGTTGCA GAACCAGTAT GAAGATGAAG AAGATGGAGT TTGGTATTCC GATTCTGAGG ATGGGTATCT GTATGAAGAC GGGGACGCCG ACGCGTATTA TGAAAACGAT GCCAACGAGG AAGATTATGA TTCCGAATCT AGTGGTGAAG AAGAATATCA GAGTAGTTTT TCGCCGTCGC AAGGCAAATC CCTTTAGTGA TTTGAAGCGA CTTGTTCTGC TGCTCCCGTT TCTGCCCTGG TCTACCTTCC CTCTCGAGAA TCCAAGTGGT TACCGACTCA TGTCACTGGA TTGCCGCTAT CATGTTTTGA TTGATGGGCG GGGAAGATAG ACATTATGCG CTCCAGTGTC AACGCTTAAC GAGTCTCGAG CATAAGTACA AGATGGCAAA TCGAGATAGC TCCGCAATTT TTTGTCTCTT TCGAATAGAA CGGATGAAAG ATGACTAAGA TGTCTGAGGT GATTGGAAAC AGGAGCTGAG ATCAGGAAAA GCAGGTTTAG TGCTACATAT CCAGCACATG CATTTGTACA ACAATAGTTT TCAGGATGTA AAGAACGTAA TGGTAGAGAT GACTTGCAAA CCGCTCATCT TCTTTCTGGT TGTTTTCCTG TTATTGTCTG TCCCTTGCCC TGGACCCTGG AAAGCAGAGA CTACTGTCTG ACAACTTCTA CAAGTTGGGT TTGCAAGCGG AAGCGGACAA CTTTTTGACG TATGGCTTGA GTGTGATAAC TCAGATCTGC TAAGCGGAGA GATGACCAGA GTTCACCCAT ACACGAGTTT AAAATACCTT ACAAGTCTTC ACCGGTTTAA TGGGAGGTAG ACAAGAGGAT TTGTTGGAGG TTGGGCTTGA ACGTACCTTG TCACAGTTGC CGCTTCGAAA AGCATTGGGA CTCGCATACA TGGCAGCACC AGAGCAGAGT GTACACTCTC CGAGGGCATT ACACAGGTGT CAACCGAGGA GCTATTTAGA AAATAGAGGG CCCTGTCTTT GGAAAGAAGA TTCTTGTTGA TATTGTTGAG ACTGAGTCTG GTTATAATGA CGCCCAGTTC TCGAGGAAGG GAGAAAAATC CTGGAGTTTC AGCCGAAATG AAAATTCTCA TGTTGTGGAG GAAGTAAACT AGTGCAGCTA ACTTGATTGT ACATGTGTGC AATATGTCTT GACAACGTAG GGAATGAAAA GAAACGAAAC ATAGTACAGT ACTCCACTTG CGTACCACGT GTTGGTGCGA GCACCGAATA TTCTTTGTAA TTCTATCAAC CGTCTATTAT TCGTCTTGCT AAAATATTTT TTTCACCAGT TAATCGTC |
CDS |
| >Mp3g19580.1 ATGCCGTCGG TAGCTATGGG GTTGACTTTT ACGGGCCCCT TCAATTTTCA CTCCAGGCTT TGGAGGTATC GCATTGATGT GTCTCACGCA TCTGCAGTCA AATTACACTA TGGAAACGGT GGATTTCCCC GGCTTAGAGG GAGGGGAAGT CCGGGATCCT GGGTTCGTTG CGGACTGGAA GCAGGCGGAA TGGCGAGAGA GGAGGAGGAG GAGGTTGTTC ACGAGCAAGG AATCTCTAGA AGAACAGTCG CTGTTTTCTG GGATCTTGAT AACAAGCCTC CGAATACTGT GCCTCCTTAT GATGCAGCTC TGAGATTGAA GACTTTAGCT GGTGAGTTAG GGGAAGTCGT GGATATGGTT GCATATGCCA ACAGGAACGC ATTCACTCAT GTACCTGCGA GGGTCCGGGA GGAAAGGCAC GATAGAAAAC TTTTGGACCA GCTCGAGAGA AGGGGTCTGG TGGAGGTGGA ACAGCCTTAC ATCTGTTCCA TGTGCGGGAG AAAATGTAAA ACAAATTATG CTTTGAAGAA GCATTTCAAG CAGCTACACG AAAGAGAGCG GCAGAAGAGG ATGAATCATC TAGATACTCT GAAAGGCAAG AAGCGAGTCA AATTTCTAGG GAAGGTTGTA GAAAAGGAAG TCAAATACAA GGAAGCAGCT AGAACGATTA TTGTACCCAA GGTTGGGTAC GGTTTAGCAA CGGAGTTGAA AAGAGCTGGA GTGATGGTGA GAACGGTGGA GAGCAGGCCT CAGGCTGCCG ATGAGGCCCT TATCCAGCAT ATGACTTTGT ACATTAACAG GGGCCTAGAT TGCCTCTTTT TGGTATCAGA TGATTCAGAC TTCCTAGAAA TTCTTAGATA CGCCAAAAGT AGAAGGCTGT ACACTGTTGT TATTGGGGAC ACTCACATTT TGAGAAGGGC AGCAGATGCC AGTTTCCTGT GGGAAGACGT CGCTTCTGGC AAAGCCCTGC AAACTGCCAG GGATACTTTC CAAAGGTGGG TCGCTGAAGA TGTTTTACGA GAGGAGTTGC AGAACCAGTA TGAAGATGAA GAAGATGGAG TTTGGTATTC CGATTCTGAG GATGGGTATC TGTATGAAGA CGGGGACGCC GACGCGTATT ATGAAAACGA TGCCAACGAG GAAGATTATG ATTCCGAATC TAGTGGTGAA GAAGAATATC AGAGTAGTTT TTCGCCGTCG CAAGGCAAAT CCCTTTAG |
Protein |
| >Mp3g19580.1 MPSVAMGLTF TGPFNFHSRL WRYRIDVSHA SAVKLHYGNG GFPRLRGRGS PGSWVRCGLE AGGMAREEEE EVVHEQGISR RTVAVFWDLD NKPPNTVPPY DAALRLKTLA GELGEVVDMV AYANRNAFTH VPARVREERH DRKLLDQLER RGLVEVEQPY ICSMCGRKCK TNYALKKHFK QLHERERQKR MNHLDTLKGK KRVKFLGKVV EKEVKYKEAA RTIIVPKVGY GLATELKRAG VMVRTVESRP QAADEALIQH MTLYINRGLD CLFLVSDDSD FLEILRYAKS RRLYTVVIGD THILRRAADA SFLWEDVASG KALQTARDTF QRWVAEDVLR EELQNQYEDE EDGVWYSDSE DGYLYEDGDA DAYYENDANE EDYDSESSGE EEYQSSFSPS QGKSL |