Mp3g20180



Description

Annotation

Database ID Description
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
PRINTS PR00364 Disease resistance protein signature
PANTHER PTHR36766 PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8
Pfam PF00931 NB-ARC domain
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.300 -
Gene3D G3DSA:1.10.8.430 -
SUPERFAMILY SSF52058 L domain-like
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
KEGG K23504 protein SERAC1
KOG KOG4658 Apoptotic ATPase; [T]
KOG KOG2029 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0049s0015 -
GO GO:0043531 ADP binding
GO GO:0050832 defense response to fungus

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR7 NBS genes Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g20180.1 chr3:22019963..22026173 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g20180 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g20180 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.