Mp3g22660
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd02241 | cupin_OxOx |
| SMART | SM00835 | Cupin_1_3 |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| Pfam | PF00190 | Cupin |
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| PRINTS | PR00325 | Germin signature |
| MapolyID | Mapoly0024s0044 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCupin56 | Cupin | Provisional |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g22660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g22660.1 CTACAGGCCG GGAAGCTAAC ACGATGTAAA ACTCTCTCGG GTATAAGAAG GATTCAGCAT GACCTTGCAA CATATCTCTC ACCAAAGCTC AGCCAAGTGA ACAACCAGCT CTAATAAAAG CCGTTGTGCT CTGAAAGTAA GTTACTTCCG AGCTCTAATC ATCGATGCTT CTTTGTTACA TTAATAAAGC GCATTTACGC ACTTTCGGGA GCACATCTCT AGACCTGGCG AGCGATTGTA GATATTTATG TGTGGAATGT GTTGGGATCC TGGTTTCAGA TTGATCAGCT TAGATGCTTC TCTTTGTGAG ATGTTTTGAA AACTAATTGG GAGTATCGTT TATACTATCC AATTTCACAA AGGACATGTT GGCTTGCAGA TCTCCAGATC TATATCGCTA AAGAACCATG GTCACAATGA AGCTGGTCGT TGTTCTTATG ATGACAACTG TCGTTGCCGT CTGCGCCCGT GACCCCGAGC TCACAACCGA CTTCGCCGTC CCAGTAGGAA TGAACGCTTC CACTGGAGAT TTCTTCACAT TCACAGGGCT CAGAAACTTC TCCGCTGCTC CAAACACCTT CGGATCCAAG AAGGTTACTA ATGTCGAATT CCCCGCTCTT ACTGGACTTG GCGTCGGTAT GACTCTCCTC GAGTACAAGC CCAACACTTT GAACCCTCCC CACATCCACC CACGTGGATC AGAGCTCACC TACGTCATGA CCGGAGACTT GGACGTCGGT CTTATCGACT CTGCCAACAA GCTTTACTCT GCCCAACTCC AGGCGGGTGA CTTGTTCGTG TTCCCTCAGG GTCTGGTCCA CTTCCAGATC AACATGTCCA AGAAACAGAG CGTTCGCGCC ATCTCTGCTT TCGGTAGCTC CAACGCCGGC ACCATCTCGT TGCCCAGTGG TATTAATTTC TGGTGTTAAG GACGAGGTTC TCCTCAAGGC TTTCAATATC ACATCCGCGG AGTTGTTGAC GCTGAAAGCT CCATTTATGC CGACCACGAA TGTAAGTTTG GCTTCATGCC GACCATTCTG CGGCTGAAAG AACCTGAAGT CTCCGGGAGG ATGTACTGCG TTTTGCATGC TTAGTACTTT CTTAGACTGC CCATCAGCTT GATGCGGATG TAGTACATGT TAAGAACTGT GCTACCACCA TAAGAACTGT TGAGTTTTAA GTGAATGTCG TCGTGGAAAT TGCTAACGGG TAATATAAGT GTACTTTTAA CCTCTGTCAA ATATGTAGAC TGAATTCAAG GTTCTCTCTT TTCACCTTCA TCATCCCT |
mRNA UTR + CDS |
| >Mp3g22660.1 CTACAGGCCG GGAAGCTAAC ACGATGTAAA ACTCTCTCGG GTATAAGAAG GATTCAGCAT GACCTTGCAA CATATCTCTC ACCAAAGCTC AGCCAAGTGA ACAACCAGCT CTAATAAAAG CCGTTGTGCT CTGAAAATCT CCAGATCTAT ATCGCTAAAG AACCATGGTC ACAATGAAGC TGGTCGTTGT TCTTATGATG ACAACTGTCG TTGCCGTCTG CGCCCGTGAC CCCGAGCTCA CAACCGACTT CGCCGTCCCA GTAGGAATGA ACGCTTCCAC TGGAGATTTC TTCACATTCA CAGGGCTCAG AAACTTCTCC GCTGCTCCAA ACACCTTCGG ATCCAAGAAG GTTACTAATG TCGAATTCCC CGCTCTTACT GGACTTGGCG TCGGTATGAC TCTCCTCGAG TACAAGCCCA ACACTTTGAA CCCTCCCCAC ATCCACCCAC GTGGATCAGA GCTCACCTAC GTCATGACCG GAGACTTGGA CGTCGGTCTT ATCGACTCTG CCAACAAGCT TTACTCTGCC CAACTCCAGG CGGGTGACTT GTTCGTGTTC CCTCAGGGTC TGGTCCACTT CCAGATCAAC ATGTCCAAGA AACAGAGCGT TCGCGCCATC TCTGCTTTCG GTAGCTCCAA CGCCGGCACC ATCTCGTTGC CCAGTGGTAT TAATTTCTGG TGTTAAGGAC GAGGTTCTCC TCAAGGCTTT CAATATCACA TCCGCGGAGT TGTTGACGCT GAAAGCTCCA TTTATGCCGA CCACGAATGT AAGTTTGGCT TCATGCCGAC CATTCTGCGG CTGAAAGAAC CTGAAGTCTC CGGGAGGATG TACTGCGTTT TGCATGCTTA GTACTTTCTT AGACTGCCCA TCAGCTTGAT GCGGATGTAG TACATGTTAA GAACTGTGCT ACCACCATAA GAACTGTTGA GTTTTAAGTG AATGTCGTCG TGGAAATTGC TAACGGGTAA TATAAGTGTA CTTTTAACCT CTGTCAAATA TGTAGACTGA ATTCAAGGTT CTCTCTTTTC ACCTTCATCA TCCCT |
CDS |
| >Mp3g22660.1 ATGGTCACAA TGAAGCTGGT CGTTGTTCTT ATGATGACAA CTGTCGTTGC CGTCTGCGCC CGTGACCCCG AGCTCACAAC CGACTTCGCC GTCCCAGTAG GAATGAACGC TTCCACTGGA GATTTCTTCA CATTCACAGG GCTCAGAAAC TTCTCCGCTG CTCCAAACAC CTTCGGATCC AAGAAGGTTA CTAATGTCGA ATTCCCCGCT CTTACTGGAC TTGGCGTCGG TATGACTCTC CTCGAGTACA AGCCCAACAC TTTGAACCCT CCCCACATCC ACCCACGTGG ATCAGAGCTC ACCTACGTCA TGACCGGAGA CTTGGACGTC GGTCTTATCG ACTCTGCCAA CAAGCTTTAC TCTGCCCAAC TCCAGGCGGG TGACTTGTTC GTGTTCCCTC AGGGTCTGGT CCACTTCCAG ATCAACATGT CCAAGAAACA GAGCGTTCGC GCCATCTCTG CTTTCGGTAG CTCCAACGCC GGCACCATCT CGTTGCCCAG TGGTATTAAT TTCTGGTGTT AA |
Protein |
| >Mp3g22660.1 MVTMKLVVVL MMTTVVAVCA RDPELTTDFA VPVGMNASTG DFFTFTGLRN FSAAPNTFGS KKVTNVEFPA LTGLGVGMTL LEYKPNTLNP PHIHPRGSEL TYVMTGDLDV GLIDSANKLY SAQLQAGDLF VFPQGLVHFQ INMSKKQSVR AISAFGSSNA GTISLPSGIN FWC |