Mp3g23740
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Coils | Coil | Coil |
| Pfam | PF03760 | Late embryogenesis abundant (LEA) group 1 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| MapolyID | Mapoly0121s0048 | - |
| GO | GO:0009793 | embryo development ending in seed dormancy |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like16 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g23740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g23740.1 AGATGTTTCC TTCTTCAATA AATGAGGCAA AACAACAGGA GAAGAGCAGA GTGCAGGACG GACGAAAAGC GTCGCAACAG ATCGCGTTGG TGCTTTTGTC TTTTTAGGTT GCAACATATT GGGAGCTTGA GAAGAACTTG TGAATGGGGA AAGCAATTCA AACTCTGAAG AGTCCTCAAC ACCTGTATAG GACGGTATCA CGTTTAGACC GACGCTGTTG TACCAATGTA AGTTGCTGAG CCCTTTGGAC AAGTGTCGCA ATGACATGGC CCGAATGCAG GAGACGAGTT ATCAAGAGCT TTGACGAGGA AATTCGGCGG TAAGCTTCAC GGTGCCACGT TATGCATGTG GACTGTTCTC CGATGAGGTG CGTGTGCAGA TCCCATCGCT GTAACCAGGT GCAATTAATC ATCTACATGC ATTCTCATAG CCTTCAGCTA GTGGCTTCCT CGTGTTTACA TTCTAACTGG AGCAATTCGA GAGCGCTCAC GGCTGAAACT ATCGAACTAT CCAACAGGCA TCGCACTGCG TGCATCTCGT CTGTAGACAC TGAGATCGAC TTGGGAACAG CCTGACAGCA AGGAAAAATG CAAGCCGCGA AGAACATGGC CGGGATGATA AAACACAAAG TGGAAGATGC TGCAGCCACC GCTGAAGAAA AGGCTGACAT TGCTAAAGCC GAGGCTGAAG AAAAGGTATC ATTCTTAAGA ATCAAATGTA ATTATTTTCT TTCCGTTGGT GATTCCTGGA AATGCTCTCT CCTGTATTTC TCGACTGTAC GGCTCGTTAT ATTGTTCTTC TATATGAATT CCACCTAGCA CCTCAAGTTT TGATCTTAAT TTCGACGATC TACTTTCCAA GTCTGTGAAT ATACCTTGCG AAGTCGAGAA TATCTCAATT CGCTCGTCGC AGGGACTTGT CTGTGAGTAG AGTCAAGTAT TTATTTCTGA ACTTGTTTCC CACACACGAG AATTTGACGA AGATTGTAAT TTCCCACGAT TCCACTTTCT GTAAAACCTT GATTCTTAGG ATTCATGCGC TTCGTTATAT ATCAGCTGTA AATTGAGAAA TTTGCCCGCA TTAAGAACTG CATGTTATTT TGGAGGATTT CAAAATTCTG AGCCATGACA GCGATGTCAC CTACTCGTCT GGTTTGCAGG TTGAGAAACT GAAGTCACAC GATGACGCAA GCAAAATAGA AGCTACCAAG AAGAAGAATG AGAAAAAAAG GGTTGCTGAG GAAACCAAAG AGAAAAAAAT TGAAGAACAT AACTCAGAAC ATGGTGGCGT TGGGATGGAC AACAAGAAAG GTCCGATTGG TGACTGTCCA ACACCTGCAG ATTTAGACAT GGCCGTAGAT AACCCCTCTC TGCCTGCGAT GAACTCTGGA ATGAACTCTA CTGTAATTCC ACAAAGTATT ACTAGCAATG CTGGACCTCT TACAGGCCAG CACTTAATAC GTAAGTAGTT GATTCAAGTT ACATTAAATT GTTATTTTGT ATATCTTTAC AATGTAAGTA TATATGCGG |
mRNA UTR + CDS |
| >Mp3g23740.1 AGATGTTTCC TTCTTCAATA AATGAGGCAA AACAACAGGA GAAGAGCAGA GTGCAGGACG GACGAAAAGC GTCGCAACAG ATCGCGTTGG TGCTTTTGTC TTTTTAGGTT GCAACATATT GGGAGCTTGA GAAGAACTTG TGAATGGGGA AAGCAATTCA AACTCTGAAG AGTCCTCAAC ACCTGTATAG GACGGTATCA CGTTTAGACC GACGCTGTTG TACCAATGTA AGTTGCTGAG CCCTTTGGAC AAGTGTCGCA ATGACATGGC CCGAATGCAG GAGACGAGTT ATCAAGAGCT TTGACGAGGA AATTCGGCGG TAAGCTTCAC GGTGCCACGT TATGCATGTG GACTGTTCTC CGATGAGGCA TCGCACTGCG TGCATCTCGT CTGTAGACAC TGAGATCGAC TTGGGAACAG CCTGACAGCA AGGAAAAATG CAAGCCGCGA AGAACATGGC CGGGATGATA AAACACAAAG TGGAAGATGC TGCAGCCACC GCTGAAGAAA AGGCTGACAT TGCTAAAGCC GAGGCTGAAG AAAAGGTTGA GAAACTGAAG TCACACGATG ACGCAAGCAA AATAGAAGCT ACCAAGAAGA AGAATGAGAA AAAAAGGGTT GCTGAGGAAA CCAAAGAGAA AAAAATTGAA GAACATAACT CAGAACATGG TGGCGTTGGG ATGGACAACA AGAAAGGTCC GATTGGTGAC TGTCCAACAC CTGCAGATTT AGACATGGCC GTAGATAACC CCTCTCTGCC TGCGATGAAC TCTGGAATGA ACTCTACTGT AATTCCACAA AGTATTACTA GCAATGCTGG ACCTCTTACA GGCCAGCACT TAATACGTAA GTAGTTGATT CAAGTTACAT TAAATTGTTA TTTTGTATAT CTTTACAATG TAAGTATATA TGCGG |
CDS |
| >Mp3g23740.1 ATGCAAGCCG CGAAGAACAT GGCCGGGATG ATAAAACACA AAGTGGAAGA TGCTGCAGCC ACCGCTGAAG AAAAGGCTGA CATTGCTAAA GCCGAGGCTG AAGAAAAGGT TGAGAAACTG AAGTCACACG ATGACGCAAG CAAAATAGAA GCTACCAAGA AGAAGAATGA GAAAAAAAGG GTTGCTGAGG AAACCAAAGA GAAAAAAATT GAAGAACATA ACTCAGAACA TGGTGGCGTT GGGATGGACA ACAAGAAAGG TCCGATTGGT GACTGTCCAA CACCTGCAGA TTTAGACATG GCCGTAGATA ACCCCTCTCT GCCTGCGATG AACTCTGGAA TGAACTCTAC TGTAATTCCA CAAAGTATTA CTAGCAATGC TGGACCTCTT ACAGGCCAGC ACTTAATACG TAAGTAG |
Protein |
| >Mp3g23740.1 MQAAKNMAGM IKHKVEDAAA TAEEKADIAK AEAEEKVEKL KSHDDASKIE ATKKKNEKKR VAEETKEKKI EEHNSEHGGV GMDNKKGPIG DCPTPADLDM AVDNPSLPAM NSGMNSTVIP QSITSNAGPL TGQHLIRK |