Mp3g25160



Description

Annotation

Database ID Description
SUPERFAMILY SSF51197 Clavaminate synthase-like
Pfam PF03171 2OG-Fe(II) oxygenase superfamily
PRINTS PR00682 Isopenicillin N synthase signature
Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal
PANTHER PTHR47990 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
ProSiteProfiles PS51471 Fe(2+) 2-oxoglutarate dioxygenase domain profile.
Gene3D G3DSA:2.60.120.330 -
KOG KOG0143 Iron/ascorbate family oxidoreductases; [QR]
MapolyID Mapoly0100s0029 -
GO GO:0016706 2-oxoglutarate-dependent dioxygenase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpDOXC22 Secondary metabolism enzyme Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g25160.1 chr3:28562504..28566227 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g25160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g25160 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.