Mp4g01100



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF10699 Male gamete fusion factor
PANTHER PTHR31764 PROTEIN HAPLESS 2
MapolyID Mapoly0066s0032 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGCS1 GENERATIVE CELL SPECIFIC 1 Published

Associated Literature (AI-based literature mining, Beta-version)

Ortholog of AtGCS1/HAP2 involved in gamete fusion; expressed independently in differentiating sperm and NOT under MpDUO1 control, showing divergence of the regulatory network.

1 core 0 peripheral

Higo, A., et al. (2018) · Nature Communications  research experimental subject
Ortholog of AtGCS1/HAP2 involved in gamete fusion; expressed independently in differentiating sperm and NOT under MpDUO1 control, showing divergence of the regulatory network.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01100.1 chr4:1287021..1294968 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g01100.2 chr4:1289870..1292089 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g01100 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g01100 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.