Mp4g02370



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.3430.10 Ammonium transporter AmtB like domains
NCBIfam TIGR00836 ammonium transporter
PANTHER PTHR43029 AMMONIUM TRANSPORTER MEP2
ProSitePatterns PS01219 Ammonium transporters signature.
PRINTS PR00342 Rhesus blood group protein signature
SUPERFAMILY SSF111352 Ammonium transporter
FunFam G3DSA:1.10.3430.10:FF:000005 Ammonium transporter
Pfam PF00909 Ammonium Transporter Family
KEGG K03320 ammonium transporter, Amt family
KOG KOG0682 Ammonia permease; [P]
MapolyID Mapoly0080s0061 -
GO GO:0008519 ammonium channel activity
GO GO:0072488 ammonium transmembrane transport
GO GO:0005886 plasma membrane
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpAMT2.2 ammonium transporter Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02370.1 chr4:2947284..2952786 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g02370 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g02370 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.