Mp4g02650



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Pfam PF13771 PHD-like zinc-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15571 ePHD
Pfam PF05033 Pre-SET motif
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
SMART SM00317 set_7
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR46223 HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
CDD cd10538 SET_SETDB-like
Gene3D G3DSA:2.170.270.10 SET domain
SUPERFAMILY SSF82199 SET domain
Pfam PF00856 SET domain
KOG KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [BK]
KOG KOG1084 Transcription factor TCF20; N-term missing; [K]
KOG KOG1847 mRNA splicing factor; N-term missing; [A]
MapolyID Mapoly0080s0034 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSUVR3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02650.1 chr4:3233171..3247619 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02650.2 chr4:3233171..3248599 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.