| Database | ID | Description |
|---|---|---|
| SMART | SM00320 | WD40_4 |
| Gene3D | G3DSA:2.130.10.10 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. |
| SUPERFAMILY | SSF50978 | WD40 repeat-like |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR15271 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B |
| FunFam | G3DSA:2.130.10.10:FF:000466 | Chromatin assembly factor 1 subunit FAS2 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain |
| Pfam | PF00400 | WD domain, G-beta repeat |
| KEGG | K10751 | chromatin assembly factor 1 subunit B |
| KOG | KOG1009 | Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats); [BL] |
| MapolyID | Mapoly0080s0001 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCAF2 | Chromatin related protein | Provisional |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g02980.1 AAGTCTAATA AGAGGTGACA CTATTGGAAG GAGAAGAACT GCGCCTGCAT CTGCTGAGCG TGAGCACTGG ACGTGGTCCG CAATCGTGGT CGAATGATTT GGCAAAGGAA GGAAAACCCG GTTCGAAAAG TTGGACTTAG AAGTGTGCAT TCAGTCTCCC GCCACTTTCT TCGTCCGCGT CCGCTGTGGC TTTGAATTTG GCGTCCCGCG CTCTTCTTGC GTCTAGGGTT CCCTCCTCTT CCAGTGGATC GGCATTCGAG CTCATTTCAA GCTTCCCCCG TCTCGTGGCG AACGAGGAAT CTCAGCGCAT TGCCGCCATC GCCCGGTCTG GCCTTCGACG AGCAGGTCAG TCGCTGTACT GTGTAAAGCG GACATTGTTG CATGGGGTAC TGAGTTCTGT TCTCCTTCCT AGTTCTGTCG AATTGCGTCT GCGACTCACA ATTTCTGTCT CTGCCTCTGA AGCCTGGCGT TCTCTTCTGC ATCAAATTTT TTCTTGCGTG CGTCGAGCCC GAATTGAGCT GCGTATTGTC GGTAGACGAG CTGTCAGCCC ATCGTTCTTC TCTATATTTA TTTGGAGCTT TTTGTTTATC GCGCAGATGT TCCTCAGGTT GTGTAGAGCT TCTCTCTGAA GCGCGCGAAC TAGAGCAGAC TGAACTTACT GGTATGGGAT TGAAGCCATT GCGAGCAGGT CTACATGATT TAGATCAGTG ATCTGGCACT TCCGAGCTTC TGTTTGAATA CAATTTTGGT CTCAGGCTCA TTTCCTAGGC GTGAACTCTT GCGGAGAGTG TAGCGACGGG CTGTTTCTTG GGATGGACTT CGACTTGCCA AATGGGCGAA AGGAACGAAC TCGTTTGGAG CTATGAGAAG CATCCAATAA GACTCGGTAG CTTCGCACCA AAAATTCTTC TCCCGAGAGG ATGTGGTGAC CACAGTCTAA TTCTTTGCCA TATTTAGTTT CCTCCTTGCT CTTCTCGGGA GCCCAGGTGG TATCGAATGG TGCCAAGCTC TATCGCCGGG AGCTTCTCCG AGGGATTGTA AGGAGTTGAT GATGCTGAGG AAACTAGCTG GTTTGTAGCT TGGTCAACAT AGGAAATTGC CGCTGGTTCT CTCGCAGCAG ATTTGGAAGA GTGGAGCGCA GGGTGCAGAA CCGTATGTTA CACCGGTCTC TGTAGAATGT CGTCTCTGAA GAAGAGGAAT TTTAGAACCA GGTGATCAGG AGTAATTGGG TTGGCCCAAG TGGCAATCGT CAGTTTGTAT CGTGAGTACG AGCAAGAAGT GGAGGGTGGC GGAACTCGAG CCAGCCAGGT ATGAAAGGAG GGACCGTCCA GATCTCCTGG CATGGCTCCG ATCCTATCCT TTCTGTGGAC TTTCATCCGA CTTCGGGGCT TCTCGCCACT GCAGGTGCTG ATCGCGACAT CAAGTTGTGG TCTTTGAATC ACGTCGAGAA ATCGAAGGTC TTGCCTACTG CGTGTTTCAA AACTAGTCTC TCCTACCATA GCTCGGCTGT GAATGTGGTT CGCTTCTCTC CATCCGGTGA ACTACTTGCC TCTGGAGCCG ACGGGGGTGA GCTAGTTATC TGGCGCCTTG TTGCAGTTGG TGAGGAGATC CCAACCTGGA AGGTTTGGAA AACACTTCGT TTCCATCTGA AAGACGTACT GGACCTGGAA TGGGCAATGG ACGGGGCATA TCTGGTATCT GCCTCGGTGG ACAACACATG TATCATCTGG GATGTCACCA GGGGAGCTGT GCAGCAAGTG TTGAGTGACC ATCAACATTA CGTCCAAGGT GTAACATGGG ACCCTGTTGG TGAGTACGTG GTTTCTCTAA GTGGTGATCG AACTTGCCGC TTCTACTCAG CACGACCGTC GACGAAGAAA CTGAAGGGCA AGGAAAAAAA GGAGGATAAG TTAAGGAAGG CGTTTGAGTG TAAGCACGTT CTTTTCAAGA GAGATGCCAC CGCCGTTGTC TCTTGCAAGG GCGATGATCT CCAGAAGCAA GTGCCTGCAA CAAAGCAGTA TCTGTTTTAC GACGAAAACA TGCCGTCTTT CTTCAGGAGA TTGTCATGGT CACCGGATGG ATCTTTCTTG GTCGTGCCAT CTGGTGTGGA GAAACAGTCG CCAGAGGCTG CTCCTTGCAG CCTTACGTAC TTGGTGTCGA GAAAAGAACT GACGAAGTCT TGTCCACAAC CTACAATGCA ACTTCCTGCC GGGAGCAAGC CCGTGATGGG AGTTCGGTTT TGTCCGGTGT ACTTCTCTCT AAGAACCGAA AAACTCCAGA AGCCCGAGAT GAATTCGTCT GAACTCGGGT GCATTGATCT TCCTTACAGA CTCGTGTTTG CAGTTGCCAC ATTATCCTGT GTTTTCATAT ATGATACACA AGAAAGCTGT CCCATAGCTA TCTTCAGTGG CCTGCACTAC GCGCCCATCA CAGATCTTGC CTGGTCGCCT GATGCTAGAT TCCTTGCTGT CTCTTCTCAA GACGGCTACT GTACGTTAGT GGGATTTGAC GAAGGCGAAC TCGGCCTGCC CCTGCCACTG GAAGAATGTA GGATCCAGCA AAAGTTCGCA CCTACGGCAG TCCCTCTGTC GGCTATGTCT TCCCCACCTC CTTTGACAGA AGGCATGATA CCGTCGGTTA TTGATCAAAC GACTCCAACT CCTGTGACTC CTGGCTATGT CAACAGAAAT GGTATAATTA CACCGACTGA AGTTTCGAAG GTGGTGAACT CAGGTAAACA GAGGTCTGAG ACTGTCAAGA TGAGGCGGGT CACACCCAAG GCTATTACAG ATATCCTGGG AGCGGTACCA GCCTCGGTAT CTCCTTCGAA TTCAGATGCA GCAATCAATG GTTCACTTGC AGAACAGAGC TGCCAACCTG ATCATGGTGC AGTGGGGTCT TCTCGGTCAC AGCTTCCAAC CGAATCTGAA GAGTCTCCAT CAGTTATTAT TTTGAAGGGG CTTGTCGGGT ACCAGTCCTC GTCGCTGTAT GTAGGAACAT TGGCACCAGA ATCAGAAACG TCCTGTAACC CGTCGTCTGA CTTAACGTTG GAGTCTTCTT TAGTCGATGA AAGTAGTTGT AGAGAAGACC AGGTAATGAC AGTGCAAGGA CCCGCCACTC CTCTGTCTAA CAAGCAGGTG GAAAACAGTG ATTTGGAGGG AACTCCAAAG CCGTCGGAAC AATTCGCTCA TATCTACGTG AGACCCTTGA AGTTTAGACG CATTACTCCG AAGCCAGTTG TCGATGAAAT GTCTCCTGTC GCATCCAAAC CCCTCACATG CTAAGGCTTA GTGTGAACAG TTTTGCACCC ATCTCGTCGG TCTACTTTTG TAAATCAGCA GCTTCTCTTG TTAGAAAGCA GATTGTAATT TAGTTCATGA ATTGGAACAA GGTTCCATCT CAGGCATCGA GGAATTGGAA ATTAGACATA GATGTCTGAG TCCAAATTTA GTCAAGAATC ATGTCGGATT GGATGGTATT CTTGCTGCTG TTGACTCTGT ACATTTCATT ATCCAGGCTG TATCATGCTG GGTTATCTAT TATAAACGTC TTAGCTCTCA ATTGATATTT CGTTGATCGA GTGTGATATG GGCACGTACG AAATTCTTCT TCTGGGAGAG ATCTGAAACT TCTAGCTGAA GGTCAAGCTT TTCATCCTAA GTACCGGCCA ATAAATCTGT CTAT |
mRNA UTR + CDS |
| >Mp4g02980.1 AAGTCTAATA AGAGGTGACA CTATTGGAAG GAGAAGAACT GCGCCTGCAT CTGCTGAGCG TGAGCACTGG ACGTGGTCCG CAATCGTGGT CGAATGATTT GGCAAAGGAA GGAAAACCCG GTTCGAAAAG TTGGACTTAG AAGTGTGCAT TCAGTCTCCC GCCACTTTCT TCGTCCGCGT CCGCTGTGGC TTTGAATTTG GCGTCCCGCG CTCTTCTTGC GTCTAGGGTT CCCTCCTCTT CCAGTGGATC GGCATTCGAG CTCATTTCAA GCTTCCCCCG TCTCGTGGCG AACGAGGAAT CTCAGCGCAT TGCCGCCATC GCCCGGTCTG GCCTTCGACG AGCAGATGTT CCTCAGGTTG TGTAGAGCTT CTCTCTGAAG CGCGCGAACT AGAGCAGACT GAACTTACTG GTATGGGATT GAAGCCATTG CGAGCAGGTC TACATGATTT AGATCAGTGA TCTGGCACTT CCGAGCTTCT GTTTGAATAC AATTTTGGTC TCAGGCTCAT TTCCTAGGCG TGAACTCTTG CGGAGAGTGT AGCGACGGGC TGTTTCTTGG GATGGACTTC GACTTGCCAA ATGGGCGAAA GGAACGAACT CGTTTGGAGC TATGAGAAGC ATCCAATAAG ACTCGGTAGC TTCGCACCAA AAATTCTTCT CCCGAGAGGA TGTGGTGACC ACAGTCTAAT TCTTTGCCAT ATTTAGTTTC CTCCTTGCTC TTCTCGGGAG CCCAGGTGGT ATCGAATGGT GCCAAGCTCT ATCGCCGGGA GCTTCTCCGA GGGATTGTAA GGAGTTGATG ATGCTGAGGA AACTAGCTGG TTTGTAGCTT GGTCAACATA GGAAATTGCC GCTGGTTCTC TCGCAGCAGA TTTGGAAGAG TGGAGCGCAG GGTGCAGAAC CGTATGTTAC ACCGGTCTCT GTAGAATGTC GTCTCTGAAG AAGAGGAATT TTAGAACCAG GTGATCAGGA GTAATTGGGT TGGCCCAAGT GGCAATCGTC AGTTTGTATC GTGAGTACGA GCAAGAAGTG GAGGGTGGCG GAACTCGAGC CAGCCAGGTA TGAAAGGAGG GACCGTCCAG ATCTCCTGGC ATGGCTCCGA TCCTATCCTT TCTGTGGACT TTCATCCGAC TTCGGGGCTT CTCGCCACTG CAGGTGCTGA TCGCGACATC AAGTTGTGGT CTTTGAATCA CGTCGAGAAA TCGAAGGTCT TGCCTACTGC GTGTTTCAAA ACTAGTCTCT CCTACCATAG CTCGGCTGTG AATGTGGTTC GCTTCTCTCC ATCCGGTGAA CTACTTGCCT CTGGAGCCGA CGGGGGTGAG CTAGTTATCT GGCGCCTTGT TGCAGTTGGT GAGGAGATCC CAACCTGGAA GGTTTGGAAA ACACTTCGTT TCCATCTGAA AGACGTACTG GACCTGGAAT GGGCAATGGA CGGGGCATAT CTGGTATCTG CCTCGGTGGA CAACACATGT ATCATCTGGG ATGTCACCAG GGGAGCTGTG CAGCAAGTGT TGAGTGACCA TCAACATTAC GTCCAAGGTG TAACATGGGA CCCTGTTGGT GAGTACGTGG TTTCTCTAAG TGGTGATCGA ACTTGCCGCT TCTACTCAGC ACGACCGTCG ACGAAGAAAC TGAAGGGCAA GGAAAAAAAG GAGGATAAGT TAAGGAAGGC GTTTGAGTGT AAGCACGTTC TTTTCAAGAG AGATGCCACC GCCGTTGTCT CTTGCAAGGG CGATGATCTC CAGAAGCAAG TGCCTGCAAC AAAGCAGTAT CTGTTTTACG ACGAAAACAT GCCGTCTTTC TTCAGGAGAT TGTCATGGTC ACCGGATGGA TCTTTCTTGG TCGTGCCATC TGGTGTGGAG AAACAGTCGC CAGAGGCTGC TCCTTGCAGC CTTACGTACT TGGTGTCGAG AAAAGAACTG ACGAAGTCTT GTCCACAACC TACAATGCAA CTTCCTGCCG GGAGCAAGCC CGTGATGGGA GTTCGGTTTT GTCCGGTGTA CTTCTCTCTA AGAACCGAAA AACTCCAGAA GCCCGAGATG AATTCGTCTG AACTCGGGTG CATTGATCTT CCTTACAGAC TCGTGTTTGC AGTTGCCACA TTATCCTGTG TTTTCATATA TGATACACAA GAAAGCTGTC CCATAGCTAT CTTCAGTGGC CTGCACTACG CGCCCATCAC AGATCTTGCC TGGTCGCCTG ATGCTAGATT CCTTGCTGTC TCTTCTCAAG ACGGCTACTG TACGTTAGTG GGATTTGACG AAGGCGAACT CGGCCTGCCC CTGCCACTGG AAGAATGTAG GATCCAGCAA AAGTTCGCAC CTACGGCAGT CCCTCTGTCG GCTATGTCTT CCCCACCTCC TTTGACAGAA GGCATGATAC CGTCGGTTAT TGATCAAACG ACTCCAACTC CTGTGACTCC TGGCTATGTC AACAGAAATG GTATAATTAC ACCGACTGAA GTTTCGAAGG TGGTGAACTC AGGTAAACAG AGGTCTGAGA CTGTCAAGAT GAGGCGGGTC ACACCCAAGG CTATTACAGA TATCCTGGGA GCGGTACCAG CCTCGGTATC TCCTTCGAAT TCAGATGCAG CAATCAATGG TTCACTTGCA GAACAGAGCT GCCAACCTGA TCATGGTGCA GTGGGGTCTT CTCGGTCACA GCTTCCAACC GAATCTGAAG AGTCTCCATC AGTTATTATT TTGAAGGGGC TTGTCGGGTA CCAGTCCTCG TCGCTGTATG TAGGAACATT GGCACCAGAA TCAGAAACGT CCTGTAACCC GTCGTCTGAC TTAACGTTGG AGTCTTCTTT AGTCGATGAA AGTAGTTGTA GAGAAGACCA GGTAATGACA GTGCAAGGAC CCGCCACTCC TCTGTCTAAC AAGCAGGTGG AAAACAGTGA TTTGGAGGGA ACTCCAAAGC CGTCGGAACA ATTCGCTCAT ATCTACGTGA GACCCTTGAA GTTTAGACGC ATTACTCCGA AGCCAGTTGT CGATGAAATG TCTCCTGTCG CATCCAAACC CCTCACATGC TAAGGCTTAG TGTGAACAGT TTTGCACCCA TCTCGTCGGT CTACTTTTGT AAATCAGCAG CTTCTCTTGT TAGAAAGCAG ATTGTAATTT AGTTCATGAA TTGGAACAAG GTTCCATCTC AGGCATCGAG GAATTGGAAA TTAGACATAG ATGTCTGAGT CCAAATTTAG TCAAGAATCA TGTCGGATTG GATGGTATTC TTGCTGCTGT TGACTCTGTA CATTTCATTA TCCAGGCTGT ATCATGCTGG GTTATCTATT ATAAACGTCT TAGCTCTCAA TTGATATTTC GTTGATCGAG TGTGATATGG GCACGTACGA AATTCTTCTT CTGGGAGAGA TCTGAAACTT CTAGCTGAAG GTCAAGCTTT TCATCCTAAG TACCGGCCAA TAAATCTGTC TAT |
CDS |
| >Mp4g02980.1 ATGAAAGGAG GGACCGTCCA GATCTCCTGG CATGGCTCCG ATCCTATCCT TTCTGTGGAC TTTCATCCGA CTTCGGGGCT TCTCGCCACT GCAGGTGCTG ATCGCGACAT CAAGTTGTGG TCTTTGAATC ACGTCGAGAA ATCGAAGGTC TTGCCTACTG CGTGTTTCAA AACTAGTCTC TCCTACCATA GCTCGGCTGT GAATGTGGTT CGCTTCTCTC CATCCGGTGA ACTACTTGCC TCTGGAGCCG ACGGGGGTGA GCTAGTTATC TGGCGCCTTG TTGCAGTTGG TGAGGAGATC CCAACCTGGA AGGTTTGGAA AACACTTCGT TTCCATCTGA AAGACGTACT GGACCTGGAA TGGGCAATGG ACGGGGCATA TCTGGTATCT GCCTCGGTGG ACAACACATG TATCATCTGG GATGTCACCA GGGGAGCTGT GCAGCAAGTG TTGAGTGACC ATCAACATTA CGTCCAAGGT GTAACATGGG ACCCTGTTGG TGAGTACGTG GTTTCTCTAA GTGGTGATCG AACTTGCCGC TTCTACTCAG CACGACCGTC GACGAAGAAA CTGAAGGGCA AGGAAAAAAA GGAGGATAAG TTAAGGAAGG CGTTTGAGTG TAAGCACGTT CTTTTCAAGA GAGATGCCAC CGCCGTTGTC TCTTGCAAGG GCGATGATCT CCAGAAGCAA GTGCCTGCAA CAAAGCAGTA TCTGTTTTAC GACGAAAACA TGCCGTCTTT CTTCAGGAGA TTGTCATGGT CACCGGATGG ATCTTTCTTG GTCGTGCCAT CTGGTGTGGA GAAACAGTCG CCAGAGGCTG CTCCTTGCAG CCTTACGTAC TTGGTGTCGA GAAAAGAACT GACGAAGTCT TGTCCACAAC CTACAATGCA ACTTCCTGCC GGGAGCAAGC CCGTGATGGG AGTTCGGTTT TGTCCGGTGT ACTTCTCTCT AAGAACCGAA AAACTCCAGA AGCCCGAGAT GAATTCGTCT GAACTCGGGT GCATTGATCT TCCTTACAGA CTCGTGTTTG CAGTTGCCAC ATTATCCTGT GTTTTCATAT ATGATACACA AGAAAGCTGT CCCATAGCTA TCTTCAGTGG CCTGCACTAC GCGCCCATCA CAGATCTTGC CTGGTCGCCT GATGCTAGAT TCCTTGCTGT CTCTTCTCAA GACGGCTACT GTACGTTAGT GGGATTTGAC GAAGGCGAAC TCGGCCTGCC CCTGCCACTG GAAGAATGTA GGATCCAGCA AAAGTTCGCA CCTACGGCAG TCCCTCTGTC GGCTATGTCT TCCCCACCTC CTTTGACAGA AGGCATGATA CCGTCGGTTA TTGATCAAAC GACTCCAACT CCTGTGACTC CTGGCTATGT CAACAGAAAT GGTATAATTA CACCGACTGA AGTTTCGAAG GTGGTGAACT CAGGTAAACA GAGGTCTGAG ACTGTCAAGA TGAGGCGGGT CACACCCAAG GCTATTACAG ATATCCTGGG AGCGGTACCA GCCTCGGTAT CTCCTTCGAA TTCAGATGCA GCAATCAATG GTTCACTTGC AGAACAGAGC TGCCAACCTG ATCATGGTGC AGTGGGGTCT TCTCGGTCAC AGCTTCCAAC CGAATCTGAA GAGTCTCCAT CAGTTATTAT TTTGAAGGGG CTTGTCGGGT ACCAGTCCTC GTCGCTGTAT GTAGGAACAT TGGCACCAGA ATCAGAAACG TCCTGTAACC CGTCGTCTGA CTTAACGTTG GAGTCTTCTT TAGTCGATGA AAGTAGTTGT AGAGAAGACC AGGTAATGAC AGTGCAAGGA CCCGCCACTC CTCTGTCTAA CAAGCAGGTG GAAAACAGTG ATTTGGAGGG AACTCCAAAG CCGTCGGAAC AATTCGCTCA TATCTACGTG AGACCCTTGA AGTTTAGACG CATTACTCCG AAGCCAGTTG TCGATGAAAT GTCTCCTGTC GCATCCAAAC CCCTCACATG CTAA |
Protein |
| >Mp4g02980.1 MKGGTVQISW HGSDPILSVD FHPTSGLLAT AGADRDIKLW SLNHVEKSKV LPTACFKTSL SYHSSAVNVV RFSPSGELLA SGADGGELVI WRLVAVGEEI PTWKVWKTLR FHLKDVLDLE WAMDGAYLVS ASVDNTCIIW DVTRGAVQQV LSDHQHYVQG VTWDPVGEYV VSLSGDRTCR FYSARPSTKK LKGKEKKEDK LRKAFECKHV LFKRDATAVV SCKGDDLQKQ VPATKQYLFY DENMPSFFRR LSWSPDGSFL VVPSGVEKQS PEAAPCSLTY LVSRKELTKS CPQPTMQLPA GSKPVMGVRF CPVYFSLRTE KLQKPEMNSS ELGCIDLPYR LVFAVATLSC VFIYDTQESC PIAIFSGLHY APITDLAWSP DARFLAVSSQ DGYCTLVGFD EGELGLPLPL EECRIQQKFA PTAVPLSAMS SPPPLTEGMI PSVIDQTTPT PVTPGYVNRN GIITPTEVSK VVNSGKQRSE TVKMRRVTPK AITDILGAVP ASVSPSNSDA AINGSLAEQS CQPDHGAVGS SRSQLPTESE ESPSVIILKG LVGYQSSSLY VGTLAPESET SCNPSSDLTL ESSLVDESSC REDQVMTVQG PATPLSNKQV ENSDLEGTPK PSEQFAHIYV RPLKFRRITP KPVVDEMSPV ASKPLTC |