Mp4g03480



Description

Annotation

Database ID Description
SMART SM00571 testlast3
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SMART SM00249 PHD_3
CDD cd15489 PHD_SF
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd20401 Tudor_AtPTM-like
PANTHER PTHR46508 PHD FINGER FAMILY PROTEIN
Pfam PF21743 PTM/DIR17-like, Tudor domain
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
Pfam PF00628 PHD-finger
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF02791 DDT domain
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Coils Coil Coil
ProSiteProfiles PS50827 DDT domain profile.
KOG KOG1473 Nucleosome remodeling factor, subunit NURF301/BPTF; C-term missing; [BK]
KOG KOG1473 Nucleosome remodeling factor, subunit NURF301/BPTF; N-term missing; [BK]
MapolyID Mapoly0044s0125 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPTM1 GUN genes Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g03480.1 chr4:4786012..4796736 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.