Mp4g03590
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.274.20 | - |
| FunFam | G3DSA:1.10.275.10:FF:000009 | Phenylalanine ammonia-lyase |
| Pfam | PF00221 | Aromatic amino acid lyase |
| Gene3D | G3DSA:1.10.275.10 | - |
| Gene3D | G3DSA:1.20.200.10 | Fumarase/aspartase (Central domain) |
| NCBIfam | TIGR01226 | phenylalanine ammonia-lyase |
| CDD | cd00332 | PAL-HAL |
| PANTHER | PTHR10362 | HISTIDINE AMMONIA-LYASE |
| SUPERFAMILY | SSF48557 | L-aspartase-like |
| KEGG | K10775 | phenylalanine ammonia-lyase [EC:4.3.1.24] |
| KOG | KOG0222 | Phenylalanine and histidine ammonia-lyase; [Q] |
| MapolyID | Mapoly0044s0114 | - |
| GO | GO:0006559 | L-phenylalanine catabolic process |
| GO | GO:0005737 | cytoplasm |
| GO | GO:0003824 | catalytic activity |
| GO | GO:0016841 | ammonia-lyase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPAL2 | Secondary metabolism enzyme, Salicylic acid related protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Secondary metabolism enzyme, Salicylic acid related protein (from nomenclature)
1 core 0 peripheral
Schwarze, C. M., et al. (2024)
· The Plant Journal research experimental subject
PAL (Mapoly0070s0071); biochemically characterized.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g03590 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g03590.1 AGTTCAGTGC TTGGCTGAAA GGTTGGCAGA CGGGCTCGAC TCTTTGATTC GGTAGACCAC ATAGAGCAGT TCAATCAGCT TCAGTCAGGA GCTCTGCCTG CAGTCATGAT GAACGAAATC TTCTCGTCCA ACTTTCAGCA GATCCGAATT CCCACTGGGA AAGGCGGAGA TACGGTGCAG TACTGCCTGA GCCCCATGGC GAAGACTGCT CCACGAACAG AGGATCCCCT GAACTGGGCG AAAGCAGCTC GGGCCATGGA GTGCAGTCAC TGGGAGGAGG TCGCCGACTT GGTGCAAGAA TTTCAGGATG CCAAGGAGGT TCTGATCCAG GGAGAGACGC TCACGGTGGC CCAGGTCGCA GCCATCGCCA GGCGGCCCGA CGTGACGGTG GTGCTCGATG CGGAGGCAGC CAAATCGCGA GTCGACGAGA GCTCCGAGTG GGTGCTGCAC AACATAAGGA AAGGGACGGA CACGTTCGGC GTCACCACGG GCTTCGGTGC GACATCGCAC CGGCGCACCG ATCAGGGAGC GGAGCTGCAA CGAGAGCTGA TCCGATTTCT GAACGCGGGG GTAATCGGCA AGGACTCGAA CAATGTGCTG CCCGTCAGCA CGACCAGAGC GGCCATGCTG GTCAGGACCA ACACTCTGCT GCAAGGCTAC TCGGGAATTC GTTGGTCGAT TTTGCAGACG ATGCAGAAAT TCCTGAACAA GCGCATTACT CCTCGGCTGC CGCTGCGGGG CACCATCACG GCGGCGGGAG ACCCCGTGCC GCTGTCCTAC ATCGCGGGCC TGCTTACGGG CCGTCCCAAT GCCCGAGCCG CGACCGAGAG CGGCGACATC GTGACGGCGC ACGAAGCGCT GAAGCTCGTC GGGCTGCTGA AGCCGTTCGA GCTGCAGCCC AAGGAGGGTC TGGCGCTGGT GAGCGGCACG GCGGTCGGGT CCGCGCTGGC GGCCACGTGC TGCTACGACG CCAACGTGTT GGCGCTCTTC GCCGAGCTGG CGTCCGCGCT GTTCTGCGAG GTGATGCAGG GCAAGCCCGA GTTCACGGAC CACCTGACCC ACCGGCTCAA GCACCACCCG GGCCAGATCG AGGCGGCCGC CATCATGGAG CACGTGCTCC ATGGCAGCTC GTACATGAAG GCCGCGGCCA CGCGGCACGA GACGGACCCG CTGCAGAAGC CGAAGCAGGA CCGGTACGCG CTACGAACCT CGCCCCAGTG GCTGGGGCCC CAGATCGAGG CCGTCCGCGC GGCCACGCAC GCCATCGAGC GCGAGATCAA CTCCGTCAAC GACAACCCGC TCATCGACGT GGCCCGTGAC AAGGTGGTCC ACGGTGGCAA CTTCCAGGGC ACGCCCATCG GCGTTTCCAT GGACAACCTG CGCCTGGCCG TCGCGGCCAT TGGCAAACTC ATGTTCGCGC AGATGTCCGA GCTCGTCAAC GACTTCTATA ACGGCGGTCT GCCGTCCAAC CTGACCGGCG GTCCGAACCC GAGTCTGGAC TACGGGTTCA AGGGCGCGGA GATCGCCATG GCCTCGTACA CTTCGGAGCT CCTCTTCCTG GCCGCGCCCG TGACGACGCA CGTCCAGAGC GCCGAGCAGC ACTACCAGGA CGTGAACTCG CTGGGGCTCC TCTCGGCCCG CAAGACGGAG GAGGCCCTCG CCATCCTCCA GCTCATGAGC TCCACGTACC TCGTGGCGCT CTGTCAGGCC GTGGACCTGC GCCACCTGGA GGAGAATCTG CAGGCCGGCG TCAAGCTGGC GGTGTCGCAG GCCGCCAGGC GGTCCCTCTT CGCCGACGCG CTCGGCTCGC TGCTACCGTC GCGCTTCTGC GAGAAGGACC TCCTCAAGGT GGTCGACGAC CAGCCCCCGT TCTCGTACGC CGACGACGCC ACCAGCGCGA CGTACCCTCT GATGCAGAAG CTGCGCCAAT GCCTGGTCGC GCACGCTCTC GGCGACGCGA ACGACGACGC GAGCTGCAGC ATCTTCCGGC GAATCGCCGT GTTCGAGGAG CAAGTGAAGA TCGAGCTCGA CGCCGCCGTG CCCGCCATTC GAGAGAAGTT CGACAAGGGC GTCGCCGCGC TGCCCAATCG AATTGCCGAT TGCCGCAGCT ATCCGCTGTA CAATTTCGTC AGATCTCTCG GTACCAAGCT GCTGGTCGGC ACGGAAACGA GGTCTCCTGG TGAGGACATC GAGCTCGTGT ATGAAGCCAT TTCCGCAGGG AAACTGGCGT CGCCCTTGCT CGACTGCTTA GCAGACTGGA ACGGATGTCC CCTATCGATC GAGCCGTCTA GAATCGTAAT ATAATTTGCA GGATCTGACA GAATTCCGTC ACGAATCAGG ACAATGAGCG ATGTCCTGAG TTTTTATATA AGATCTAAAC CCTTCATATA GTGTACATAG CGATCACAGA TATAGGCCGA GCAAGTTCAG CTCACGTTTG TAATCTATAC GAAGTAAACT TCGGAGGAAC CAATAGTTGC CTCTCTCTTC A |
mRNA UTR + CDS |
| >Mp4g03590.1 AGTTCAGTGC TTGGCTGAAA GGTTGGCAGA CGGGCTCGAC TCTTTGATTC GGTAGACCAC ATAGAGCAGT TCAATCAGCT TCAGTCAGGA GCTCTGCCTG CAGTCATGAT GAACGAAATC TTCTCGTCCA ACTTTCAGCA GATCCGAATT CCCACTGGGA AAGGCGGAGA TACGGTGCAG TACTGCCTGA GCCCCATGGC GAAGACTGCT CCACGAACAG AGGATCCCCT GAACTGGGCG AAAGCAGCTC GGGCCATGGA GTGCAGTCAC TGGGAGGAGG TCGCCGACTT GGTGCAAGAA TTTCAGGATG CCAAGGAGGT TCTGATCCAG GGAGAGACGC TCACGGTGGC CCAGGTCGCA GCCATCGCCA GGCGGCCCGA CGTGACGGTG GTGCTCGATG CGGAGGCAGC CAAATCGCGA GTCGACGAGA GCTCCGAGTG GGTGCTGCAC AACATAAGGA AAGGGACGGA CACGTTCGGC GTCACCACGG GCTTCGGTGC GACATCGCAC CGGCGCACCG ATCAGGGAGC GGAGCTGCAA CGAGAGCTGA TCCGATTTCT GAACGCGGGG GTAATCGGCA AGGACTCGAA CAATGTGCTG CCCGTCAGCA CGACCAGAGC GGCCATGCTG GTCAGGACCA ACACTCTGCT GCAAGGCTAC TCGGGAATTC GTTGGTCGAT TTTGCAGACG ATGCAGAAAT TCCTGAACAA GCGCATTACT CCTCGGCTGC CGCTGCGGGG CACCATCACG GCGGCGGGAG ACCCCGTGCC GCTGTCCTAC ATCGCGGGCC TGCTTACGGG CCGTCCCAAT GCCCGAGCCG CGACCGAGAG CGGCGACATC GTGACGGCGC ACGAAGCGCT GAAGCTCGTC GGGCTGCTGA AGCCGTTCGA GCTGCAGCCC AAGGAGGGTC TGGCGCTGGT GAGCGGCACG GCGGTCGGGT CCGCGCTGGC GGCCACGTGC TGCTACGACG CCAACGTGTT GGCGCTCTTC GCCGAGCTGG CGTCCGCGCT GTTCTGCGAG GTGATGCAGG GCAAGCCCGA GTTCACGGAC CACCTGACCC ACCGGCTCAA GCACCACCCG GGCCAGATCG AGGCGGCCGC CATCATGGAG CACGTGCTCC ATGGCAGCTC GTACATGAAG GCCGCGGCCA CGCGGCACGA GACGGACCCG CTGCAGAAGC CGAAGCAGGA CCGGTACGCG CTACGAACCT CGCCCCAGTG GCTGGGGCCC CAGATCGAGG CCGTCCGCGC GGCCACGCAC GCCATCGAGC GCGAGATCAA CTCCGTCAAC GACAACCCGC TCATCGACGT GGCCCGTGAC AAGGTGGTCC ACGGTGGCAA CTTCCAGGGC ACGCCCATCG GCGTTTCCAT GGACAACCTG CGCCTGGCCG TCGCGGCCAT TGGCAAACTC ATGTTCGCGC AGATGTCCGA GCTCGTCAAC GACTTCTATA ACGGCGGTCT GCCGTCCAAC CTGACCGGCG GTCCGAACCC GAGTCTGGAC TACGGGTTCA AGGGCGCGGA GATCGCCATG GCCTCGTACA CTTCGGAGCT CCTCTTCCTG GCCGCGCCCG TGACGACGCA CGTCCAGAGC GCCGAGCAGC ACTACCAGGA CGTGAACTCG CTGGGGCTCC TCTCGGCCCG CAAGACGGAG GAGGCCCTCG CCATCCTCCA GCTCATGAGC TCCACGTACC TCGTGGCGCT CTGTCAGGCC GTGGACCTGC GCCACCTGGA GGAGAATCTG CAGGCCGGCG TCAAGCTGGC GGTGTCGCAG GCCGCCAGGC GGTCCCTCTT CGCCGACGCG CTCGGCTCGC TGCTACCGTC GCGCTTCTGC GAGAAGGACC TCCTCAAGGT GGTCGACGAC CAGCCCCCGT TCTCGTACGC CGACGACGCC ACCAGCGCGA CGTACCCTCT GATGCAGAAG CTGCGCCAAT GCCTGGTCGC GCACGCTCTC GGCGACGCGA ACGACGACGC GAGCTGCAGC ATCTTCCGGC GAATCGCCGT GTTCGAGGAG CAAGTGAAGA TCGAGCTCGA CGCCGCCGTG CCCGCCATTC GAGAGAAGTT CGACAAGGGC GTCGCCGCGC TGCCCAATCG AATTGCCGAT TGCCGCAGCT ATCCGCTGTA CAATTTCGTC AGATCTCTCG GTACCAAGCT GCTGGTCGGC ACGGAAACGA GGTCTCCTGG TGAGGACATC GAGCTCGTGT ATGAAGCCAT TTCCGCAGGG AAACTGGCGT CGCCCTTGCT CGACTGCTTA GCAGACTGGA ACGGATGTCC CCTATCGATC GAGCCGTCTA GAATCGTAAT ATAATTTGCA GGATCTGACA GAATTCCGTC ACGAATCAGG ACAATGAGCG ATGTCCTGAG TTTTTATATA AGATCTAAAC CCTTCATATA GTGTACATAG CGATCACAGA TATAGGCCGA GCAAGTTCAG CTCACGTTTG TAATCTATAC GAAGTAAACT TCGGAGGAAC CAATAGTTGC CTCTCTCTTC A |
CDS |
| >Mp4g03590.1 ATGATGAACG AAATCTTCTC GTCCAACTTT CAGCAGATCC GAATTCCCAC TGGGAAAGGC GGAGATACGG TGCAGTACTG CCTGAGCCCC ATGGCGAAGA CTGCTCCACG AACAGAGGAT CCCCTGAACT GGGCGAAAGC AGCTCGGGCC ATGGAGTGCA GTCACTGGGA GGAGGTCGCC GACTTGGTGC AAGAATTTCA GGATGCCAAG GAGGTTCTGA TCCAGGGAGA GACGCTCACG GTGGCCCAGG TCGCAGCCAT CGCCAGGCGG CCCGACGTGA CGGTGGTGCT CGATGCGGAG GCAGCCAAAT CGCGAGTCGA CGAGAGCTCC GAGTGGGTGC TGCACAACAT AAGGAAAGGG ACGGACACGT TCGGCGTCAC CACGGGCTTC GGTGCGACAT CGCACCGGCG CACCGATCAG GGAGCGGAGC TGCAACGAGA GCTGATCCGA TTTCTGAACG CGGGGGTAAT CGGCAAGGAC TCGAACAATG TGCTGCCCGT CAGCACGACC AGAGCGGCCA TGCTGGTCAG GACCAACACT CTGCTGCAAG GCTACTCGGG AATTCGTTGG TCGATTTTGC AGACGATGCA GAAATTCCTG AACAAGCGCA TTACTCCTCG GCTGCCGCTG CGGGGCACCA TCACGGCGGC GGGAGACCCC GTGCCGCTGT CCTACATCGC GGGCCTGCTT ACGGGCCGTC CCAATGCCCG AGCCGCGACC GAGAGCGGCG ACATCGTGAC GGCGCACGAA GCGCTGAAGC TCGTCGGGCT GCTGAAGCCG TTCGAGCTGC AGCCCAAGGA GGGTCTGGCG CTGGTGAGCG GCACGGCGGT CGGGTCCGCG CTGGCGGCCA CGTGCTGCTA CGACGCCAAC GTGTTGGCGC TCTTCGCCGA GCTGGCGTCC GCGCTGTTCT GCGAGGTGAT GCAGGGCAAG CCCGAGTTCA CGGACCACCT GACCCACCGG CTCAAGCACC ACCCGGGCCA GATCGAGGCG GCCGCCATCA TGGAGCACGT GCTCCATGGC AGCTCGTACA TGAAGGCCGC GGCCACGCGG CACGAGACGG ACCCGCTGCA GAAGCCGAAG CAGGACCGGT ACGCGCTACG AACCTCGCCC CAGTGGCTGG GGCCCCAGAT CGAGGCCGTC CGCGCGGCCA CGCACGCCAT CGAGCGCGAG ATCAACTCCG TCAACGACAA CCCGCTCATC GACGTGGCCC GTGACAAGGT GGTCCACGGT GGCAACTTCC AGGGCACGCC CATCGGCGTT TCCATGGACA ACCTGCGCCT GGCCGTCGCG GCCATTGGCA AACTCATGTT CGCGCAGATG TCCGAGCTCG TCAACGACTT CTATAACGGC GGTCTGCCGT CCAACCTGAC CGGCGGTCCG AACCCGAGTC TGGACTACGG GTTCAAGGGC GCGGAGATCG CCATGGCCTC GTACACTTCG GAGCTCCTCT TCCTGGCCGC GCCCGTGACG ACGCACGTCC AGAGCGCCGA GCAGCACTAC CAGGACGTGA ACTCGCTGGG GCTCCTCTCG GCCCGCAAGA CGGAGGAGGC CCTCGCCATC CTCCAGCTCA TGAGCTCCAC GTACCTCGTG GCGCTCTGTC AGGCCGTGGA CCTGCGCCAC CTGGAGGAGA ATCTGCAGGC CGGCGTCAAG CTGGCGGTGT CGCAGGCCGC CAGGCGGTCC CTCTTCGCCG ACGCGCTCGG CTCGCTGCTA CCGTCGCGCT TCTGCGAGAA GGACCTCCTC AAGGTGGTCG ACGACCAGCC CCCGTTCTCG TACGCCGACG ACGCCACCAG CGCGACGTAC CCTCTGATGC AGAAGCTGCG CCAATGCCTG GTCGCGCACG CTCTCGGCGA CGCGAACGAC GACGCGAGCT GCAGCATCTT CCGGCGAATC GCCGTGTTCG AGGAGCAAGT GAAGATCGAG CTCGACGCCG CCGTGCCCGC CATTCGAGAG AAGTTCGACA AGGGCGTCGC CGCGCTGCCC AATCGAATTG CCGATTGCCG CAGCTATCCG CTGTACAATT TCGTCAGATC TCTCGGTACC AAGCTGCTGG TCGGCACGGA AACGAGGTCT CCTGGTGAGG ACATCGAGCT CGTGTATGAA GCCATTTCCG CAGGGAAACT GGCGTCGCCC TTGCTCGACT GCTTAGCAGA CTGGAACGGA TGTCCCCTAT CGATCGAGCC GTCTAGAATC GTAATATAA |
Protein |
| >Mp4g03590.1 MMNEIFSSNF QQIRIPTGKG GDTVQYCLSP MAKTAPRTED PLNWAKAARA MECSHWEEVA DLVQEFQDAK EVLIQGETLT VAQVAAIARR PDVTVVLDAE AAKSRVDESS EWVLHNIRKG TDTFGVTTGF GATSHRRTDQ GAELQRELIR FLNAGVIGKD SNNVLPVSTT RAAMLVRTNT LLQGYSGIRW SILQTMQKFL NKRITPRLPL RGTITAAGDP VPLSYIAGLL TGRPNARAAT ESGDIVTAHE ALKLVGLLKP FELQPKEGLA LVSGTAVGSA LAATCCYDAN VLALFAELAS ALFCEVMQGK PEFTDHLTHR LKHHPGQIEA AAIMEHVLHG SSYMKAAATR HETDPLQKPK QDRYALRTSP QWLGPQIEAV RAATHAIERE INSVNDNPLI DVARDKVVHG GNFQGTPIGV SMDNLRLAVA AIGKLMFAQM SELVNDFYNG GLPSNLTGGP NPSLDYGFKG AEIAMASYTS ELLFLAAPVT THVQSAEQHY QDVNSLGLLS ARKTEEALAI LQLMSSTYLV ALCQAVDLRH LEENLQAGVK LAVSQAARRS LFADALGSLL PSRFCEKDLL KVVDDQPPFS YADDATSATY PLMQKLRQCL VAHALGDAND DASCSIFRRI AVFEEQVKIE LDAAVPAIRE KFDKGVAALP NRIADCRSYP LYNFVRSLGT KLLVGTETRS PGEDIELVYE AISAGKLASP LLDCLADWNG CPLSIEPSRI VI |