Mp4g04430



Description

Annotation

Database ID Description
ProSitePatterns PS00026 Chitin recognition or binding domain signature.
ProSiteProfiles PS50941 Chitin-binding type-1 domain profile.
SUPERFAMILY SSF57016 Plant lectins/antimicrobial peptides
CDD cd00035 ChtBD1
FunFam G3DSA:3.30.60.10:FF:000001 Basic endochitinase
Pfam PF00182 Chitinase class I
Gene3D G3DSA:3.30.20.10 Endochitinase, domain 2
PIRSF PIRSF001060 Endochitinase
CDD cd00325 chitinase_GH19
Pfam PF00187 Chitin recognition protein
Gene3D G3DSA:1.10.530.10 -
FunFam G3DSA:3.30.20.10:FF:000001 Endochitinase (Chitinase)
SUPERFAMILY SSF53955 Lysozyme-like
SMART SM00270 ChitinBD_3
Gene3D G3DSA:3.30.60.10 -
PRINTS PR00451 Chitin-binding domain signature
PANTHER PTHR22595 CHITINASE-RELATED
KEGG K20547 basic endochitinase B [EC:3.2.1.14]
KOG KOG4742 Predicted chitinase; [R]
MapolyID Mapoly0044s0030 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGH19.5 Cell wall related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g04430.1 chr4:5710112..5712296 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.