Mp4g04770
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Coils | Coil | Coil |
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| PANTHER | PTHR35201 | TERPENE SYNTHASE |
| Pfam | PF19086 | Terpene synthase family 2, C-terminal metal binding |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| MapolyID | Mapoly0150s0002 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMTPSL19 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g04770 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g04770.1 TTATAATCCT CTCTTGGATC ATTGAGCTTT CCCAGTCTTT ACTTCCAACC ATCTTCTTGT CGGGAAAGTT TCACACGGAG GAATTCTAGT GCGATGGCTC CACAACACTC GGCATCTACC GTCTTGAGCA TCAGATCTGA TTTTCGAGAA GGACAGTTTC GTGGGCAGCT GAAGAGCGAA CTGGACAGAA ACGGCAGCTG CAACAGTTTT CAGAACGTTT ACAGAATTCC ACATTTCCAG CACAGTTACC CCAAGGCCCA ACTAAACCCC TTGACTCCCG AGTACACAGA CATTGCTAAT GACTGGTTGG TTTCTTTTGG CGTAGATAAG GAGCTGGGTC CAAGTTTATG GACATCGTTT GTGGCGGCCA AATCTCCTGA GCTTATAGGC TATGTGTTCT ACAACGATGT AGAGCCAAGA GATTTCCTCT GGCTCTGCAA ATTCGTTGCA TTCATTTTTG CTTTCGATAC GAAGATGGAT GAGAGTGATT GGGCAGACGC TGTAGAATTA TCCTGTGATA TGATTTTAGA GATGAGTTTG CCGTTATTGT GGAATGACCC TGAGAACAAG AGATTACTGG AACGCTTGAA CTCCATTTTG GATCGGTTGA TGGCCACCGA GGCTTCCAGA GAACGCCTAC AGAATCGCAC ATTTCATGCA GATTTGGTGC ATGCCAGGAA CGAATCCAAA TCACGTAAGT TAATCTTTGG ACGCAAAATC TCGACGAATT TTCACCTGTC TTTTGTTCAC GTCACCCTTG GAATTGTCCG CTGAGTTTAA GCTGCTATGC TGGCACTTAT AGCCACGGGC AATGCGTTGT AAGCATGTTA CAGTGGCAAA CTAGCCATGG GAGACTGAGT TTGGAGATAG GCCAACTCAG AATCAGGATT CATATATCCA CGCTGCGCCG CAGGTCGTTG TATATTTCAA TCCACCTTCA TTTATTGACT GGATTCTGAA TCTGACTAGC TATTGTTTTA CTCTCGCAGT TCTCGACGTT AAGATGGGAC CTTTGGCGTC GGCATTGCGA GATCTGTGGC TGGAATATAT AGAAGCTGTG CCTGCTGAGT TTGCATCTAG GGAGGCTGAG CTTTTTCTAG ACATCTTGTC CGCGTGCCTC TGGGAACAAA AGAATCGAAA GACAAGAGAA GAAATCACTA TTCCCGATTT CATTACCCTT CGACGATCTG CTGTGTGTGC GTTGCCGTTA GTTGTGAGTT TCAACCAGTA TCACGATCCT TTTCTCTTAT TCCTCCTTCG GTAGGATGAA AAACACCATT ACAGATTTGC TGATTTGTTT TCGTCTTATG CATGTGAACA GGTATGTACC GATCTCATAA TTGAGCATAA AAGACAGAAC TATGCAATGT CTCATCTTCC CAATAGCATT TTCTATGGAA ATAATATGCA GAATCTACTC GCCGCCTCTG CTGACTGCCT TGCGTGGCAT AATGACGCCT TCAGCTTCGA GAAGGTAGGC CCAGTGCAGG ACACTTCGTA TCATTTCTGT CTATCAAACT CACACCTCCG GACCGGGGAT TCTTCTAAGT AATATATTCG ACGTGACCCA TGGCTTGATA ATCTTACGTG ATGGTCTCTT TACTTCGGGC TTACTAGTCT CTAATTGTCA CTTGATTTAC AGGAAATATA CCGCGATGGC GATTTGCACA ATTTAGTGGA AATCGTGTCC CGACATTACA ACTGTCATTC GCACACACAA GCAGGAGAAC TTGTAATCGA ATTACTGCAT GACAGAATTG CTGAGATGGA GCTTGCGTAC GAAAACCTAA AATCTGAGGC CTCGCCTGAG TCTCACCCCG CAATCGACCG GTACATGAAA ACGTGTAGAG ATTGGATTGC TGGAACTCAC GAGTTCCACA TGACTTCCGA GCGGTACAAG AATTCCAATT CTCTATCTGA GATAGAAGAA ATCTGAAAAG GTAGAACACA GCATCAAATT CTCAATTACA AGTGTCAGTT ACAAGTGTTC AGGCTTGGGT GAAAGTGGGC ACGAATATAC TTGGTATTAA GTTTGCCTGC AATCGTTAAG CAAGGCTGAA TATAAACTAG AGTTGATGTT GCTGAAGCGC TCTCATGGCA TGTAGGACTT ACTGTGTATG AGCAAGTAGT CAAGGGAAGT TGTATTCAAG GACCTCCAAT CTGGATAAAT ACGATAGTAC TTAAAATTCT GGACTGTCTA ATGCTTCCAT CATACTGCTG CATTTTTTCA AGACTACCAA GTATACCTTC AAAAAT |
mRNA UTR + CDS |
| >Mp4g04770.1 TTATAATCCT CTCTTGGATC ATTGAGCTTT CCCAGTCTTT ACTTCCAACC ATCTTCTTGT CGGGAAAGTT TCACACGGAG GAATTCTAGT GCGATGGCTC CACAACACTC GGCATCTACC GTCTTGAGCA TCAGATCTGA TTTTCGAGAA GGACAGTTTC GTGGGCAGCT GAAGAGCGAA CTGGACAGAA ACGGCAGCTG CAACAGTTTT CAGAACGTTT ACAGAATTCC ACATTTCCAG CACAGTTACC CCAAGGCCCA ACTAAACCCC TTGACTCCCG AGTACACAGA CATTGCTAAT GACTGGTTGG TTTCTTTTGG CGTAGATAAG GAGCTGGGTC CAAGTTTATG GACATCGTTT GTGGCGGCCA AATCTCCTGA GCTTATAGGC TATGTGTTCT ACAACGATGT AGAGCCAAGA GATTTCCTCT GGCTCTGCAA ATTCGTTGCA TTCATTTTTG CTTTCGATAC GAAGATGGAT GAGAGTGATT GGGCAGACGC TGTAGAATTA TCCTGTGATA TGATTTTAGA GATGAGTTTG CCGTTATTGT GGAATGACCC TGAGAACAAG AGATTACTGG AACGCTTGAA CTCCATTTTG GATCGGTTGA TGGCCACCGA GGCTTCCAGA GAACGCCTAC AGAATCGCAC ATTTCATGCA GATTTGGTGC ATGCCAGGAA CGAATCCAAA TCACTTCTCG ACGTTAAGAT GGGACCTTTG GCGTCGGCAT TGCGAGATCT GTGGCTGGAA TATATAGAAG CTGTGCCTGC TGAGTTTGCA TCTAGGGAGG CTGAGCTTTT TCTAGACATC TTGTCCGCGT GCCTCTGGGA ACAAAAGAAT CGAAAGACAA GAGAAGAAAT CACTATTCCC GATTTCATTA CCCTTCGACG ATCTGCTGTG TGTGCGTTGC CGTTAGTTGT ATGTACCGAT CTCATAATTG AGCATAAAAG ACAGAACTAT GCAATGTCTC ATCTTCCCAA TAGCATTTTC TATGGAAATA ATATGCAGAA TCTACTCGCC GCCTCTGCTG ACTGCCTTGC GTGGCATAAT GACGCCTTCA GCTTCGAGAA GGAAATATAC CGCGATGGCG ATTTGCACAA TTTAGTGGAA ATCGTGTCCC GACATTACAA CTGTCATTCG CACACACAAG CAGGAGAACT TGTAATCGAA TTACTGCATG ACAGAATTGC TGAGATGGAG CTTGCGTACG AAAACCTAAA ATCTGAGGCC TCGCCTGAGT CTCACCCCGC AATCGACCGG TACATGAAAA CGTGTAGAGA TTGGATTGCT GGAACTCACG AGTTCCACAT GACTTCCGAG CGGTACAAGA ATTCCAATTC TCTATCTGAG ATAGAAGAAA TCTGAAAAGG TAGAACACAG CATCAAATTC TCAATTACAA GTGTCAGTTA CAAGTGTTCA GGCTTGGGTG AAAGTGGGCA CGAATATACT TGGTATTAAG TTTGCCTGCA ATCGTTAAGC AAGGCTGAAT ATAAACTAGA GTTGATGTTG CTGAAGCGCT CTCATGGCAT GTAGGACTTA CTGTGTATGA GCAAGTAGTC AAGGGAAGTT GTATTCAAGG ACCTCCAATC TGGATAAATA CGATAGTACT TAAAATTCTG GACTGTCTAA TGCTTCCATC ATACTGCTGC ATTTTTTCAA GACTACCAAG TATACCTTCA AAAAT |
CDS |
| >Mp4g04770.1 ATGGCTCCAC AACACTCGGC ATCTACCGTC TTGAGCATCA GATCTGATTT TCGAGAAGGA CAGTTTCGTG GGCAGCTGAA GAGCGAACTG GACAGAAACG GCAGCTGCAA CAGTTTTCAG AACGTTTACA GAATTCCACA TTTCCAGCAC AGTTACCCCA AGGCCCAACT AAACCCCTTG ACTCCCGAGT ACACAGACAT TGCTAATGAC TGGTTGGTTT CTTTTGGCGT AGATAAGGAG CTGGGTCCAA GTTTATGGAC ATCGTTTGTG GCGGCCAAAT CTCCTGAGCT TATAGGCTAT GTGTTCTACA ACGATGTAGA GCCAAGAGAT TTCCTCTGGC TCTGCAAATT CGTTGCATTC ATTTTTGCTT TCGATACGAA GATGGATGAG AGTGATTGGG CAGACGCTGT AGAATTATCC TGTGATATGA TTTTAGAGAT GAGTTTGCCG TTATTGTGGA ATGACCCTGA GAACAAGAGA TTACTGGAAC GCTTGAACTC CATTTTGGAT CGGTTGATGG CCACCGAGGC TTCCAGAGAA CGCCTACAGA ATCGCACATT TCATGCAGAT TTGGTGCATG CCAGGAACGA ATCCAAATCA CTTCTCGACG TTAAGATGGG ACCTTTGGCG TCGGCATTGC GAGATCTGTG GCTGGAATAT ATAGAAGCTG TGCCTGCTGA GTTTGCATCT AGGGAGGCTG AGCTTTTTCT AGACATCTTG TCCGCGTGCC TCTGGGAACA AAAGAATCGA AAGACAAGAG AAGAAATCAC TATTCCCGAT TTCATTACCC TTCGACGATC TGCTGTGTGT GCGTTGCCGT TAGTTGTATG TACCGATCTC ATAATTGAGC ATAAAAGACA GAACTATGCA ATGTCTCATC TTCCCAATAG CATTTTCTAT GGAAATAATA TGCAGAATCT ACTCGCCGCC TCTGCTGACT GCCTTGCGTG GCATAATGAC GCCTTCAGCT TCGAGAAGGA AATATACCGC GATGGCGATT TGCACAATTT AGTGGAAATC GTGTCCCGAC ATTACAACTG TCATTCGCAC ACACAAGCAG GAGAACTTGT AATCGAATTA CTGCATGACA GAATTGCTGA GATGGAGCTT GCGTACGAAA ACCTAAAATC TGAGGCCTCG CCTGAGTCTC ACCCCGCAAT CGACCGGTAC ATGAAAACGT GTAGAGATTG GATTGCTGGA ACTCACGAGT TCCACATGAC TTCCGAGCGG TACAAGAATT CCAATTCTCT ATCTGAGATA GAAGAAATCT GA |
Protein |
| >Mp4g04770.1 MAPQHSASTV LSIRSDFREG QFRGQLKSEL DRNGSCNSFQ NVYRIPHFQH SYPKAQLNPL TPEYTDIAND WLVSFGVDKE LGPSLWTSFV AAKSPELIGY VFYNDVEPRD FLWLCKFVAF IFAFDTKMDE SDWADAVELS CDMILEMSLP LLWNDPENKR LLERLNSILD RLMATEASRE RLQNRTFHAD LVHARNESKS LLDVKMGPLA SALRDLWLEY IEAVPAEFAS REAELFLDIL SACLWEQKNR KTREEITIPD FITLRRSAVC ALPLVVCTDL IIEHKRQNYA MSHLPNSIFY GNNMQNLLAA SADCLAWHND AFSFEKEIYR DGDLHNLVEI VSRHYNCHSH TQAGELVIEL LHDRIAEMEL AYENLKSEAS PESHPAIDRY MKTCRDWIAG THEFHMTSER YKNSNSLSEI EEI |