Mp4g05750
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:6.10.140.1430 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR47877 | LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN |
| Pfam | PF02987 | Late embryogenesis abundant protein |
| KOG | KOG4744 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| MapolyID | Mapoly0087s0016 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like19 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g05750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g05750.1 TACCATCCAC CCGAACAAAC TACTCGCAGA CTGTTTCACG CAAGTTGTTT CCACTCGATC GTTGTGCTTT ACACTTCTTT CGCTTCCTTC TGCCCGATCT TTAGCTTGTT TTGTACTCGT TGAGTGAGAG TTCGAAGATC TCCGACAATG TCTTCCAATC AGTACAACTC CAGCTACGAT ACCACCGCAC AGAAGACGGA GCAGGCCAAG CGATCTGCTG CCGAGGCCGC CGACAGGACG AAGCAATTTG GAGCTGAGAA AACTGGCCAA GTACAGCAAG CTGCGTCTGA TGCCACTGGG ACTGTTCAAG ACAAGGCCGC GAGTGCCTGG GAGTCGACCA AGAACATTGC TGCCAACATC GCCAACACTG TCCAGGAGAA GGCAGCTCAG GCATACAACT CCGCCAGCCA AACTGCAGGG CAGACTGCCG AGACTGTCAA AGACAAGGCT TACCAGGCCA AGGATGTCAC TGCTGAGAAA GCCACTGAAG CCAAAGACGT GACGGCTAAC AAAACTGCGG AAGCTCAAAC CTTCACCGGC GATAAATCTT CCCAGACTGG AGCTGCCACT CAGAGCTACG CGCAGCAGGT AATTCGAAAA ACCGCATCGT CGAGATTCTG CGAAAATTCG TTATTATTTT CATAGTCAAT GCCGGAACGC AATGAAAATC CAGAGCACAT TAAAACTACT CGTGATTTTC ATCTGTCCTA CAGTACGCAA TATGCGCAGT TACACTTGCA TTTGATTATA ATTTATATTT GTGTACCTGT TGGGGACGTC GAAGAAGAAA GATAACTCGA CTTGAAATTC TAATTCATGC TAGTAGACTG ATGATATGCC GTCCAAATAA TTGGCAGTTA GTTACAAAGC CAGAAAGTTT ATTTTCTTGC TACGACTGAA TTCGCACCGC CAATTCTTGT GTTGTGCAAT CATGTGAGGA GGATGCTAAT ACGTCGTAAG AATTTTTTAC AGGGTGTTGA TCTTGCCAAG GGCGTGTACC TGGGAGTGAA AGATGCGGTA ACCGGAAATT ACGGCGCTAA CAGGCCACAG TAAGCACCCA CAACACGGTT CACAACGAAG TTGGTCTCAT ACTATGTACA TAAGGAGACC TGTCAATGCT CCTTGGTTTA ATGGGTAGAA TGTTTATATG AAAGTTCGAT TAGACGAATT GCGGCAGCAG GATATAATCG GCAGATCTCT TATCTTGCAT AGATCTATGC AAGTCTATTC GGTCTGTGAT TAATTGTAAG GAAGTTTTGC CACTCACAGA AATGTGAAAA TATAATATGC CAGTTTGATA CTTGATTTTT TCTT |
mRNA UTR + CDS |
| >Mp4g05750.1 TACCATCCAC CCGAACAAAC TACTCGCAGA CTGTTTCACG CAAGTTGTTT CCACTCGATC GTTGTGCTTT ACACTTCTTT CGCTTCCTTC TGCCCGATCT TTAGCTTGTT TTGTACTCGT TGAGTGAGAG TTCGAAGATC TCCGACAATG TCTTCCAATC AGTACAACTC CAGCTACGAT ACCACCGCAC AGAAGACGGA GCAGGCCAAG CGATCTGCTG CCGAGGCCGC CGACAGGACG AAGCAATTTG GAGCTGAGAA AACTGGCCAA GTACAGCAAG CTGCGTCTGA TGCCACTGGG ACTGTTCAAG ACAAGGCCGC GAGTGCCTGG GAGTCGACCA AGAACATTGC TGCCAACATC GCCAACACTG TCCAGGAGAA GGCAGCTCAG GCATACAACT CCGCCAGCCA AACTGCAGGG CAGACTGCCG AGACTGTCAA AGACAAGGCT TACCAGGCCA AGGATGTCAC TGCTGAGAAA GCCACTGAAG CCAAAGACGT GACGGCTAAC AAAACTGCGG AAGCTCAAAC CTTCACCGGC GATAAATCTT CCCAGACTGG AGCTGCCACT CAGAGCTACG CGCAGCAGGG TGTTGATCTT GCCAAGGGCG TGTACCTGGG AGTGAAAGAT GCGGTAACCG GAAATTACGG CGCTAACAGG CCACAGTAAG CACCCACAAC ACGGTTCACA ACGAAGTTGG TCTCATACTA TGTACATAAG GAGACCTGTC AATGCTCCTT GGTTTAATGG GTAGAATGTT TATATGAAAG TTCGATTAGA CGAATTGCGG CAGCAGGATA TAATCGGCAG ATCTCTTATC TTGCATAGAT CTATGCAAGT CTATTCGGTC TGTGATTAAT TGTAAGGAAG TTTTGCCACT CACAGAAATG TGAAAATATA ATATGCCAGT TTGATACTTG ATTTTTTCTT |
CDS |
| >Mp4g05750.1 ATGTCTTCCA ATCAGTACAA CTCCAGCTAC GATACCACCG CACAGAAGAC GGAGCAGGCC AAGCGATCTG CTGCCGAGGC CGCCGACAGG ACGAAGCAAT TTGGAGCTGA GAAAACTGGC CAAGTACAGC AAGCTGCGTC TGATGCCACT GGGACTGTTC AAGACAAGGC CGCGAGTGCC TGGGAGTCGA CCAAGAACAT TGCTGCCAAC ATCGCCAACA CTGTCCAGGA GAAGGCAGCT CAGGCATACA ACTCCGCCAG CCAAACTGCA GGGCAGACTG CCGAGACTGT CAAAGACAAG GCTTACCAGG CCAAGGATGT CACTGCTGAG AAAGCCACTG AAGCCAAAGA CGTGACGGCT AACAAAACTG CGGAAGCTCA AACCTTCACC GGCGATAAAT CTTCCCAGAC TGGAGCTGCC ACTCAGAGCT ACGCGCAGCA GGGTGTTGAT CTTGCCAAGG GCGTGTACCT GGGAGTGAAA GATGCGGTAA CCGGAAATTA CGGCGCTAAC AGGCCACAGT AA |
Protein |
| >Mp4g05750.1 MSSNQYNSSY DTTAQKTEQA KRSAAEAADR TKQFGAEKTG QVQQAASDAT GTVQDKAASA WESTKNIAAN IANTVQEKAA QAYNSASQTA GQTAETVKDK AYQAKDVTAE KATEAKDVTA NKTAEAQTFT GDKSSQTGAA TQSYAQQGVD LAKGVYLGVK DAVTGNYGAN RPQ |