Mp4g07520



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF06775 Putative adipose-regulatory protein (Seipin)
PANTHER PTHR21212 BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN
KEGG K19365 seipin
KOG KOG4200 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG0943 Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily; N-term missing; C-term missing; [O]
MapolyID Mapoly0115s0029 -
GO GO:0030176 obsolete integral component of endoplasmic reticulum membrane
GO GO:0034389 lipid droplet organization
GO GO:0019915 lipid storage

Nomenclature

Gene symbol Product Transcript ID Status
MpSEIPIN lipid droplets associated protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp4g07520.1 chr4:9780046..9785520 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g07520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g07520 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.