Mp4g09250
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PRINTS | PR00325 | Germin signature |
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| CDD | cd02241 | cupin_OxOx |
| SMART | SM00835 | Cupin_1_3 |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| Pfam | PF00190 | Cupin |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| MapolyID | Mapoly0112s0025 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCupin57 | Cupin | Provisional |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g09250 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g09250.1 AAGAGCTCAA CGTGGATTGA GTGACGATCG CAAATCCTCC GGATCTGTCG CCGGCATGGG AAAAGTCTTC GATCCTTCGC TGAAGTTGCT CGCGTCTCTT TTGACAGTCG GAGCGAATTC ACCACAGAAA GGAGGCAGCG AGGAGGTGGA GTAACAGCAG GACTGGGAAA TTCTATCGGT CCACGAACAT TTTCACTCGT AGCCAAACCA ACGCTTCACG TCGCGGGTCT TATCTTGGCA GCGAGGAATA TAAAGACGTC AATTGTCAAC AGATGTAGCT GCACCGCTCT CCTCCGAAGT CGTGTGTAGA GCAGATACCG CCTGCTGTTG CCTGAGAAGA ACGATCAGTC ATGGACTCGA AGATCGTGTT CGCGGGGCTC TTCCTCGTGG TGTTAGCCGT CGGAGTAGGG GCATCTGACC CCGAGCTCAC CACCGACTTC TCGGCCCCCG CCGGCATCGA TGGCAACTAT TTCAAGTCAA CATTGCTGAA GGGCGTTCCC GTGGCATCGC CGAATTTCGC CACCGTGACC GGAGCAAACC AGAACAACTT CCCCGCTCTC ACAGGATTGG GCGTCTCGTC TGCACTGCTG CAATTCCCCC CCGGAGCTCT GAACCCTCCT CACACTCATC CCCGTGGTAC CGAACTGTTC TACTGCATGC AAGGATGCGT CGATGTGGGT ATCGTCGACA CCACCAACAA GCTCTTCACC ACCAGCGTTT GCGAAGGTGA ATCCGTCGTG TTTCCCAAGG GTTTGGTTCA CTTCCAGATC AACAGAGGCA AGACTCTGGC CAAGGGACTG GTGGGATTCA GCAGCTCCAA CCCAGGTACC AACAGACTTC CCAACGTTCT CTTCAAGTCC GGAATCGCCG ATGACGTGCT GATGAAAGCT TTCGGTGTCG GCAAGATGAC CATCGAGCAG CTGAAGAATG CCAAGGTCAA CTAAATGTGC TCAGAGAAAG TAGTTCCTGT TGTTTAGCAT AGTCGATCTC CATGGAAGAC TCGCCCCAAT CACTTTCCAC CGATGTCTGT CGGGAGAGCA AACGATGATG CGAGTTTTCA AATCATGTAA TTTTTCTGTC ACGAGTTTCT GTCTACGTAA ATTTGTGACA ATGATAATGG CAGGTCCAGA CTTGACCTGC TTCCTTCCAA TATGTATAAC CTGCTACATT TGCCCCTCGC AGTTCCGAAA GCTTCTGGCT CTGCCACTCT GACCTTCTCT GGGCCTGCAT GCAAGTGATC TCATCATCAA AGTAATGTCT CACACTCAAT CTCCCGGGTT TACACTCATC CCGTTTCTTA CACATGAAGA TGAAGAAATG TAAGTGTGAC CTCATACCAA TGTGAGAGAG GATGACAAGA AAGAATATCA ATTTCTAAGA TAACTTGCTG TAAACATAGT TGAAATCCAG CGCTGGC |
mRNA UTR + CDS |
| >Mp4g09250.1 AAGAGCTCAA CGTGGATTGA GTGACGATCG CAAATCCTCC GGATCTGTCG CCGGCATGGG AAAAGTCTTC GATCCTTCGC TGAAGTTGCT CGCGTCTCTT TTGACAGTCG GAGCGAATTC ACCACAGAAA GGAGGCAGCG AGGAGGTGGA GTAACAGCAG GACTGGGAAA TTCTATCGGT CCACGAACAT TTTCACTCGT AGCCAAACCA ACGCTTCACG TCGCGGGTCT TATCTTGGCA GCGAGGAATA TAAAGACGTC AATTGTCAAC AGATGTAGCT GCACCGCTCT CCTCCGAAGT CGTGTGTAGA GCAGATACCG CCTGCTGTTG CCTGAGAAGA ACGATCAGTC ATGGACTCGA AGATCGTGTT CGCGGGGCTC TTCCTCGTGG TGTTAGCCGT CGGAGTAGGG GCATCTGACC CCGAGCTCAC CACCGACTTC TCGGCCCCCG CCGGCATCGA TGGCAACTAT TTCAAGTCAA CATTGCTGAA GGGCGTTCCC GTGGCATCGC CGAATTTCGC CACCGTGACC GGAGCAAACC AGAACAACTT CCCCGCTCTC ACAGGATTGG GCGTCTCGTC TGCACTGCTG CAATTCCCCC CCGGAGCTCT GAACCCTCCT CACACTCATC CCCGTGGTAC CGAACTGTTC TACTGCATGC AAGGATGCGT CGATGTGGGT ATCGTCGACA CCACCAACAA GCTCTTCACC ACCAGCGTTT GCGAAGGTGA ATCCGTCGTG TTTCCCAAGG GTTTGGTTCA CTTCCAGATC AACAGAGGCA AGACTCTGGC CAAGGGACTG GTGGGATTCA GCAGCTCCAA CCCAGGTACC AACAGACTTC CCAACGTTCT CTTCAAGTCC GGAATCGCCG ATGACGTGCT GATGAAAGCT TTCGGTGTCG GCAAGATGAC CATCGAGCAG CTGAAGAATG CCAAGGTCAA CTAAATGTGC TCAGAGAAAG TAGTTCCTGT TGTTTAGCAT AGTCGATCTC CATGGAAGAC TCGCCCCAAT CACTTTCCAC CGATGTCTGT CGGGAGAGCA AACGATGATG CGAGTTTTCA AATCATGTAA TTTTTCTGTC ACGAGTTTCT GTCTACGTAA ATTTGTGACA ATGATAATGG CAGGTCCAGA CTTGACCTGC TTCCTTCCAA TATGTATAAC CTGCTACATT TGCCCCTCGC AGTTCCGAAA GCTTCTGGCT CTGCCACTCT GACCTTCTCT GGGCCTGCAT GCAAGTGATC TCATCATCAA AGTAATGTCT CACACTCAAT CTCCCGGGTT TACACTCATC CCGTTTCTTA CACATGAAGA TGAAGAAATG TAAGTGTGAC CTCATACCAA TGTGAGAGAG GATGACAAGA AAGAATATCA ATTTCTAAGA TAACTTGCTG TAAACATAGT TGAAATCCAG CGCTGGC |
CDS |
| >Mp4g09250.1 ATGGACTCGA AGATCGTGTT CGCGGGGCTC TTCCTCGTGG TGTTAGCCGT CGGAGTAGGG GCATCTGACC CCGAGCTCAC CACCGACTTC TCGGCCCCCG CCGGCATCGA TGGCAACTAT TTCAAGTCAA CATTGCTGAA GGGCGTTCCC GTGGCATCGC CGAATTTCGC CACCGTGACC GGAGCAAACC AGAACAACTT CCCCGCTCTC ACAGGATTGG GCGTCTCGTC TGCACTGCTG CAATTCCCCC CCGGAGCTCT GAACCCTCCT CACACTCATC CCCGTGGTAC CGAACTGTTC TACTGCATGC AAGGATGCGT CGATGTGGGT ATCGTCGACA CCACCAACAA GCTCTTCACC ACCAGCGTTT GCGAAGGTGA ATCCGTCGTG TTTCCCAAGG GTTTGGTTCA CTTCCAGATC AACAGAGGCA AGACTCTGGC CAAGGGACTG GTGGGATTCA GCAGCTCCAA CCCAGGTACC AACAGACTTC CCAACGTTCT CTTCAAGTCC GGAATCGCCG ATGACGTGCT GATGAAAGCT TTCGGTGTCG GCAAGATGAC CATCGAGCAG CTGAAGAATG CCAAGGTCAA CTAA |
Protein |
| >Mp4g09250.1 MDSKIVFAGL FLVVLAVGVG ASDPELTTDF SAPAGIDGNY FKSTLLKGVP VASPNFATVT GANQNNFPAL TGLGVSSALL QFPPGALNPP HTHPRGTELF YCMQGCVDVG IVDTTNKLFT TSVCEGESVV FPKGLVHFQI NRGKTLAKGL VGFSSSNPGT NRLPNVLFKS GIADDVLMKA FGVGKMTIEQ LKNAKVN |