Mp4g11950



Description

Annotation

Database ID Description
FunFam G3DSA:3.40.50.300:FF:000169 ABC transporter C family member 3
SUPERFAMILY SSF90123 ABC transporter transmembrane region
Pfam PF00664 ABC transporter transmembrane region
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
Gene3D G3DSA:3.40.50.300 -
FunFam G3DSA:3.40.50.300:FF:000508 ABC transporter C family member 5
Pfam PF00005 ABC transporter
FunFam G3DSA:1.20.1560.10:FF:000003 ABC transporter C family member 10
CDD cd03244 ABCC_MRP_domain2
SMART SM00382 AAA_5
FunFam G3DSA:1.20.1560.10:FF:000002 ABC transporter C family member 5
ProSitePatterns PS00211 ABC transporters family signature.
CDD cd18580 ABC_6TM_ABCC_D2
CDD cd18579 ABC_6TM_ABCC_D1
PANTHER PTHR24223 ATP-BINDING CASSETTE SUB-FAMILY C
CDD cd03250 ABCC_MRP_domain1
KEGG K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2
KOG KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [Q]
MapolyID Mapoly0011s0180 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCC6 ABC transporters Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g11950.1 chr4:15014716..15024343 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g11950.2 chr4:15014716..15024343 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.