Mp4g12310



Description

Annotation

Database ID Description
SMART SM00365 LRR_sd22_2
SUPERFAMILY SSF52047 RNI-like
FunFam G3DSA:3.80.10.10:FF:000416 Probable leucine-rich repeat receptor-like protein kinase At5g63930
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF13855 Leucine rich repeat
Pfam PF08263 Leucine rich repeat N-terminal domain
SUPERFAMILY SSF52058 L domain-like
PRINTS PR00019 Leucine-rich repeat signature
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
FunFam G3DSA:3.80.10.10:FF:000129 Leucine-rich repeat receptor-like kinase
FunFam G3DSA:3.30.200.20:FF:000150 serine/threonine-protein kinase BRI1-like 2
FunFam G3DSA:3.80.10.10:FF:000233 Leucine-rich repeat receptor-like protein kinase TDR
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Pfam PF00560 Leucine Rich Repeat
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
SMART SM00220 serkin_6
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS51450 Leucine-rich repeat profile.
FunFam G3DSA:1.10.510.10:FF:000526 serine/threonine-protein kinase BRI1-like 2
FunFam G3DSA:3.80.10.10:FF:000095 LRR receptor-like serine/threonine-protein kinase GSO1
Pfam PF07714 Protein tyrosine and serine/threonine kinase
PANTHER PTHR45974 RECEPTOR-LIKE PROTEIN 55
SMART SM00369 LRR_typ_2
KEGG K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0011s0213 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpLRR-RLK.59 LRR-RLK, peptide receptor Provisional

Associated Literature (AI-based literature mining, Beta-version)

LRR-RLK, peptide receptor (from nomenclature)

0 core 2 peripheral

Zheng, B., et al. (2019) · Nature Communications  research sequence comparator
Marchantia EMS1 ortholog (Mapoly0011s0213.1) listed among land-plant EMS1 sequences to show conservation across land plants; not functionally studied here.
Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Serine/threonine protein kinase; listed in Table 1 among MpKAN-responsive DEGs.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12310.1 chr4:15492225..15501240 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g12310 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g12310 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.