Mp4g13380



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.10 ""winged helix"" repressor DNA binding domain
MobiDBLite mobidb-lite consensus disorder prediction
PRINTS PR00046 Major sigma-70 factor signature
Pfam PF04542 Sigma-70 region 2
TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
Pfam PF04539 Sigma-70 region 3
Pfam PF04545 Sigma-70, region 4
CDD cd06171 Sigma70_r4
TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family
ProSitePatterns PS00715 Sigma-70 factors family signature 1.
SUPERFAMILY SSF88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
PANTHER PTHR30603:SF45 RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC
PANTHER PTHR30603 RNA POLYMERASE SIGMA FACTOR RPO
PIRSF PIRSF000767 Sigma_factor_SigC
Pfam PF00140 Sigma-70 factor, region 1.2
Gene3D G3DSA:1.10.601.10 RNA Polymerase Primary Sigma Factor
ProSitePatterns PS00716 Sigma-70 factors family signature 2.
SUPERFAMILY SSF88946 Sigma2 domain of RNA polymerase sigma factors
MapolyID Mapoly0214s0004 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSIG2 Ortholog of Arabidopsis SIG2 gene Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g13380.1 chr4:14909151..14913404 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.