Mp4g13750



Description

Annotation

Database ID Description
FunFam G3DSA:3.40.120.10:FF:000009 Phosphoglucomutase, cytoplasmic 1
PANTHER PTHR22573 PHOSPHOHEXOMUTASE FAMILY MEMBER
Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Gene3D G3DSA:3.40.120.10 -
ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.
SUPERFAMILY SSF53738 Phosphoglucomutase, first 3 domains
Gene3D G3DSA:3.30.310.50 -
FunFam G3DSA:3.40.120.10:FF:000005 Phosphoglucomutase 5
Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CDD cd03085 PGM1
PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature
FunFam G3DSA:3.40.120.10:FF:000004 Phosphoglucomutase 5
SUPERFAMILY SSF55957 Phosphoglucomutase, C-terminal domain
Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
FunFam G3DSA:3.30.310.50:FF:000002 Phosphoglucomutase 5
KEGG K01835 phosphoglucomutase [EC:5.4.2.2]
KOG KOG0625 Phosphoglucomutase; [G]
MapolyID Mapoly0202s0014 -
GO GO:0000287 magnesium ion binding
GO GO:0004614 phosphoglucomutase activity
GO GO:0071704 obsolete organic substance metabolic process
GO GO:0016868 intramolecular phosphotransferase activity
GO GO:0005975 carbohydrate metabolic process
GO GO:0005829 cytosol

Nomenclature

Gene symbol Product Transcript ID Status
MpPGM1 Plastidic phosphoglucomutase Published

Associated Literature (AI-based literature mining, Beta-version)

Phosphoglucomutase with a plastid transit peptide; MpPGM1-Citrine localized to the plastid and Mppgm1-1ge knockout mutants were generated, showing reduced starch/amyloplast formation and impaired thallus gravitropism.

1 core 2 peripheral

Hashimoto-Sugimoto M, Norizuki T, Segami S, Ohta Y, Suetsugu N, Ueda T, Morita MT. (2025) · Journal of experimental botany  research experimental subject
Phosphoglucomutase with a plastid transit peptide; MpPGM1-Citrine localized to the plastid and Mppgm1-1ge knockout mutants were generated, showing reduced starch/amyloplast formation and impaired thallus gravitropism.
Norizuki, T., et al. (2023) · Frontiers in Plant Biology  research experimental tool
Plastid-localized phosphoglucomutase used as a plastid marker; expressed as Citrine and mTurquoise2 fusions to track plastid morphology during spermiogenesis.
Koide, E., et al. (2020) · Plant and Cell Physiology  research experimental background
Phosphoglucomutase (Mapoly0202s0014); carbohydrate-metabolism enzyme (DEG/context).

Transcript models

Transcript ID Location Sequences Extract region
Mp4g13750.1 chr4:17900365..17907315 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g13750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g13750 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.