Mp4g14200
Description
Annotation
| Database | ID | Description |
|---|---|---|
| FunFam | G3DSA:3.40.47.10:FF:000025 | Chalcone synthase 2 |
| Pfam | PF00195 | Chalcone and stilbene synthases, N-terminal domain |
| PIRSF | PIRSF000451 | PKS_III |
| Gene3D | G3DSA:3.40.47.10 | - |
| SUPERFAMILY | SSF53901 | Thiolase-like |
| Pfam | PF02797 | Chalcone and stilbene synthases, C-terminal domain |
| CDD | cd00831 | CHS_like |
| FunFam | G3DSA:3.40.47.10:FF:000014 | Chalcone synthase 1 |
| PANTHER | PTHR11877 | HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
| KEGG | K00660 | chalcone synthase [EC:2.3.1.74] |
| MapolyID | Mapoly0070s0062 | - |
| GO | GO:0009058 | biosynthetic process |
| GO | GO:0030639 | polyketide biosynthetic process |
| GO | GO:0016746 | acyltransferase activity |
| GO | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups |
Nomenclature
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g14200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g14200.1 GTCAGGCCTC TCTCAGCCAG ATTGTGGGAG ATTGTGAGCA TTCGTCTTGT GCTTCTTCTA TCTGATTCTG GGAACGAGCT ACAGGCTCCA GTCACTTACT TCCTCAAAGC TCGATAGAGT TTAGTACTGA GATTGTGAGA CAGTCTTGCA GTGCTTTCCA GCTGAAGAAA TGGCCAACAA CGTCAATGCC GCTGCTTACA AACACCGGAG GGCTGTTGGG CCAGCGACAG TTCTCGCTAT TGGCAAGGCG ACTCCCCCCA CAGCGTATCC TCAGAGCGAG TACCCGGATT TCTTCTTCAA CATAACTAAC TGCAATCACA AGACTGAGCT CAAAGCCAAA TTCGCTCGAA TTTGTAAGTA TCATCTCCGT CTACACTGCC TTATGGTGCA GATTGTTCTC CTGGTCCTTG CTGATAGTGC TCGCTTGAGA AGACACATTT AAGAGTATGA TCAGTAGATA TTTTACTTCA AATTCATACT TTCAGTGTCT CGATCTTATA ATCTGACCAA CGTCATTAAA TCTTTCTGTT CAGGCAAGAA CTCAGGGATC AACAAAAGGT ACTTCCATTG CACAGAGGAC ATCCTGAAGG CGAATCCTTC GATGTGCACG TACCTGGAAC CTTCTCTGGA TATCCGACAA GATATTGCCA TCAGAGAGGT GCCCAGATTG GCAGAAAAGG CAGCGATTGA GGCCTTGGCA GAATGGGGCC AACCAAGAGA GCAAATCACT CATGTCGTGT TTGCAACCAC GAGCGGAGTG AACATGCCCG GAGCGGACCT CACTCTAACC AGGCTCTTGG GTTTGAACCC GAACGTGAAC CGCACCATGC TCTACCAACA AGGCTGCTTC GGAGGCGCAA CAGTCCTGCG CGTCGCCAAA GATCTGGCTG AGAACAACAA GGGCGCCCGT GTGCTGACAG TGGTGAGCGA GCTCACGTGT GTGACCTTCC GTGCACCCAA CGAAGAACAT CTGGACAATC TGGTGGGTTC AGCCATCTTC GGCGACGGAG CTTCAGTACT AGTCATCGGA TCTGATCCTA TACCTGAGGT GGAGAAACCC CAGTTCGAGA TTCACTGGTC AGGGGAGACT ATTTTGCCAG AGAGCGATGG TGCTATTGAG GGCCGGCTGA CAGAAGCTGG ACTCATTTTC CATCTGCTGA AGGACGTCCC CGGCCTCATC TCCAGAAACA CCCTTCCCAT TTTCAACAAA GCAATTGAAG TGGCAGGATC TCCGAGCTGG AACGATCTGT TCTGGTGTGT ACACCCGGGA GGCCGTGCCA TTCTGGACGA AGTGGCCAAG ACTCTGAGCT TGAAGCCGGA GAAATTGGAG GCGACGAGAG ATATTCTGTA CAATTACGGA AACATGTCCG GTGCTAGCGT GCTGTTCGTG CTGGATCAGA TGAGGAGGCG GTCGGCTGAG AAGAACAGCT TAACCACAGG AGAAGGATGC GAGTGGGGGC TGGTAGTTGG ATTCGGACCC GGTTTGACAG TCGAAGTTTC GGTACTGAAA GCCATTGCCA CTGGTCACTA AACTCCTAGA CTAAGGCCGA TCACTCGGAA GTGATTTTTG ATAATATATC TCCTACCTCC ATAGAAGTTT TTAAATTTAG ATAACGAAAG GGAAGTCCTT GGATTCTGCG AATCCTGTAC GCTAGGTAAT GTTTCCCCGA GGACTGCCGC AACATGCAGA ACAGTCTAGC ACGGAATTAT ATCACTCGTT ACAGTACCAT ATACTACGGT AGAGGGGAGG GAGATCTGTT GATAAGAGGT ACGGCTCAAT TGCAGCCTAA GACTGTAGCC GCTTATGCCA CAAACCTAGG ATGATTCTTT GTGTCGAGAC GTACGAGCTT GTGAAAGCGT GTACCTTACA TCGGCAATAC CTGTATATAA AAGGGAATCG CTTAAAGTTT CTTCTA |
mRNA UTR + CDS |
| >Mp4g14200.1 GTCAGGCCTC TCTCAGCCAG ATTGTGGGAG ATTGTGAGCA TTCGTCTTGT GCTTCTTCTA TCTGATTCTG GGAACGAGCT ACAGGCTCCA GTCACTTACT TCCTCAAAGC TCGATAGAGT TTAGTACTGA GATTGTGAGA CAGTCTTGCA GTGCTTTCCA GCTGAAGAAA TGGCCAACAA CGTCAATGCC GCTGCTTACA AACACCGGAG GGCTGTTGGG CCAGCGACAG TTCTCGCTAT TGGCAAGGCG ACTCCCCCCA CAGCGTATCC TCAGAGCGAG TACCCGGATT TCTTCTTCAA CATAACTAAC TGCAATCACA AGACTGAGCT CAAAGCCAAA TTCGCTCGAA TTTGCAAGAA CTCAGGGATC AACAAAAGGT ACTTCCATTG CACAGAGGAC ATCCTGAAGG CGAATCCTTC GATGTGCACG TACCTGGAAC CTTCTCTGGA TATCCGACAA GATATTGCCA TCAGAGAGGT GCCCAGATTG GCAGAAAAGG CAGCGATTGA GGCCTTGGCA GAATGGGGCC AACCAAGAGA GCAAATCACT CATGTCGTGT TTGCAACCAC GAGCGGAGTG AACATGCCCG GAGCGGACCT CACTCTAACC AGGCTCTTGG GTTTGAACCC GAACGTGAAC CGCACCATGC TCTACCAACA AGGCTGCTTC GGAGGCGCAA CAGTCCTGCG CGTCGCCAAA GATCTGGCTG AGAACAACAA GGGCGCCCGT GTGCTGACAG TGGTGAGCGA GCTCACGTGT GTGACCTTCC GTGCACCCAA CGAAGAACAT CTGGACAATC TGGTGGGTTC AGCCATCTTC GGCGACGGAG CTTCAGTACT AGTCATCGGA TCTGATCCTA TACCTGAGGT GGAGAAACCC CAGTTCGAGA TTCACTGGTC AGGGGAGACT ATTTTGCCAG AGAGCGATGG TGCTATTGAG GGCCGGCTGA CAGAAGCTGG ACTCATTTTC CATCTGCTGA AGGACGTCCC CGGCCTCATC TCCAGAAACA CCCTTCCCAT TTTCAACAAA GCAATTGAAG TGGCAGGATC TCCGAGCTGG AACGATCTGT TCTGGTGTGT ACACCCGGGA GGCCGTGCCA TTCTGGACGA AGTGGCCAAG ACTCTGAGCT TGAAGCCGGA GAAATTGGAG GCGACGAGAG ATATTCTGTA CAATTACGGA AACATGTCCG GTGCTAGCGT GCTGTTCGTG CTGGATCAGA TGAGGAGGCG GTCGGCTGAG AAGAACAGCT TAACCACAGG AGAAGGATGC GAGTGGGGGC TGGTAGTTGG ATTCGGACCC GGTTTGACAG TCGAAGTTTC GGTACTGAAA GCCATTGCCA CTGGTCACTA AACTCCTAGA CTAAGGCCGA TCACTCGGAA GTGATTTTTG ATAATATATC TCCTACCTCC ATAGAAGTTT TTAAATTTAG ATAACGAAAG GGAAGTCCTT GGATTCTGCG AATCCTGTAC GCTAGGTAAT GTTTCCCCGA GGACTGCCGC AACATGCAGA ACAGTCTAGC ACGGAATTAT ATCACTCGTT ACAGTACCAT ATACTACGGT AGAGGGGAGG GAGATCTGTT GATAAGAGGT ACGGCTCAAT TGCAGCCTAA GACTGTAGCC GCTTATGCCA CAAACCTAGG ATGATTCTTT GTGTCGAGAC GTACGAGCTT GTGAAAGCGT GTACCTTACA TCGGCAATAC CTGTATATAA AAGGGAATCG CTTAAAGTTT CTTCTA |
CDS |
| >Mp4g14200.1 ATGGCCAACA ACGTCAATGC CGCTGCTTAC AAACACCGGA GGGCTGTTGG GCCAGCGACA GTTCTCGCTA TTGGCAAGGC GACTCCCCCC ACAGCGTATC CTCAGAGCGA GTACCCGGAT TTCTTCTTCA ACATAACTAA CTGCAATCAC AAGACTGAGC TCAAAGCCAA ATTCGCTCGA ATTTGCAAGA ACTCAGGGAT CAACAAAAGG TACTTCCATT GCACAGAGGA CATCCTGAAG GCGAATCCTT CGATGTGCAC GTACCTGGAA CCTTCTCTGG ATATCCGACA AGATATTGCC ATCAGAGAGG TGCCCAGATT GGCAGAAAAG GCAGCGATTG AGGCCTTGGC AGAATGGGGC CAACCAAGAG AGCAAATCAC TCATGTCGTG TTTGCAACCA CGAGCGGAGT GAACATGCCC GGAGCGGACC TCACTCTAAC CAGGCTCTTG GGTTTGAACC CGAACGTGAA CCGCACCATG CTCTACCAAC AAGGCTGCTT CGGAGGCGCA ACAGTCCTGC GCGTCGCCAA AGATCTGGCT GAGAACAACA AGGGCGCCCG TGTGCTGACA GTGGTGAGCG AGCTCACGTG TGTGACCTTC CGTGCACCCA ACGAAGAACA TCTGGACAAT CTGGTGGGTT CAGCCATCTT CGGCGACGGA GCTTCAGTAC TAGTCATCGG ATCTGATCCT ATACCTGAGG TGGAGAAACC CCAGTTCGAG ATTCACTGGT CAGGGGAGAC TATTTTGCCA GAGAGCGATG GTGCTATTGA GGGCCGGCTG ACAGAAGCTG GACTCATTTT CCATCTGCTG AAGGACGTCC CCGGCCTCAT CTCCAGAAAC ACCCTTCCCA TTTTCAACAA AGCAATTGAA GTGGCAGGAT CTCCGAGCTG GAACGATCTG TTCTGGTGTG TACACCCGGG AGGCCGTGCC ATTCTGGACG AAGTGGCCAA GACTCTGAGC TTGAAGCCGG AGAAATTGGA GGCGACGAGA GATATTCTGT ACAATTACGG AAACATGTCC GGTGCTAGCG TGCTGTTCGT GCTGGATCAG ATGAGGAGGC GGTCGGCTGA GAAGAACAGC TTAACCACAG GAGAAGGATG CGAGTGGGGG CTGGTAGTTG GATTCGGACC CGGTTTGACA GTCGAAGTTT CGGTACTGAA AGCCATTGCC ACTGGTCACT AA |
Protein |
| >Mp4g14200.1 MANNVNAAAY KHRRAVGPAT VLAIGKATPP TAYPQSEYPD FFFNITNCNH KTELKAKFAR ICKNSGINKR YFHCTEDILK ANPSMCTYLE PSLDIRQDIA IREVPRLAEK AAIEALAEWG QPREQITHVV FATTSGVNMP GADLTLTRLL GLNPNVNRTM LYQQGCFGGA TVLRVAKDLA ENNKGARVLT VVSELTCVTF RAPNEEHLDN LVGSAIFGDG ASVLVIGSDP IPEVEKPQFE IHWSGETILP ESDGAIEGRL TEAGLIFHLL KDVPGLISRN TLPIFNKAIE VAGSPSWNDL FWCVHPGGRA ILDEVAKTLS LKPEKLEATR DILYNYGNMS GASVLFVLDQ MRRRSAEKNS LTTGEGCEWG LVVGFGPGLT VEVSVLKAIA TGH |