Mp4g14450
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF53901 | Thiolase-like |
| PANTHER | PTHR11877 | HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
| FunFam | G3DSA:3.40.47.10:FF:000014 | Chalcone synthase 1 |
| CDD | cd00831 | CHS_like |
| FunFam | G3DSA:3.40.47.10:FF:000025 | Chalcone synthase 2 |
| Pfam | PF00195 | Chalcone and stilbene synthases, N-terminal domain |
| Pfam | PF02797 | Chalcone and stilbene synthases, C-terminal domain |
| Gene3D | G3DSA:3.40.47.10 | - |
| PIRSF | PIRSF000451 | PKS_III |
| KEGG | K00660 | chalcone synthase [EC:2.3.1.74] |
| MapolyID | Mapoly0070s0036 | - |
| GO | GO:0009058 | biosynthetic process |
| GO | GO:0030639 | polyketide biosynthetic process |
| GO | GO:0016746 | acyltransferase activity |
| GO | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPKS12 | polyketide synthase MpPKS12/MpSTCS1C | Published | |
| MpSTCS1C | polyketide synthase MpPKS12/MpSTCS1C | Published |
Formerly registered as MpPKS/CHS17 until 2025-09-09.
Associated Literature (AI-based literature mining, Beta-version)
polyketide synthase MpPKS12/MpSTCS1C (from nomenclature)
0 core 1 peripheral
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced CHS (chalcone synthase) flavonoid-pathway gene (annotation).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g14450 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g14450.1 TCTACTCTGG TACTCAGAAG TTTCGGTGTC TAGTACAGTC TGCTCTTAGA ATACAACTGC GAATTCCGAA AATTGGGATC TCAGTCTTCG GGGTGTATTG AATTGCATCG AAGGTTTTGT AGCAGAAGCT GAGAGCGTAG AGATGGCCAA CAATGCCAAT GCCAATGCTG CTACTGGTTA CAGACATCAG AGGGCTAATG GACCCGCGAC AGTCCTAGCC ATTGGCAAGG CTACTCCCCC CACAGCGTAC CCGCAAAGTG AATACCCGGA CTTCTTCTTC AACGTCACCA ACACCAATCA CAAGACTGAG CTCAAGGCCA AATTTGCTCG CATCTGTAAG AACCATGATT ATCGATGATC TATCGAGTCC ATCTTCCGGC GTGTAATTGC TTCGTATTTT TTTCTGGCTA TGGAAGTCGT TCGATGTCGT GCATTACAAA CTCATTTCGG TCAGTGAATC AAAAATACTC TTCTTTGTCT GATCCGGCTG TTCATGACAT GATCTGATTT CAGGCAAGAA TTCCGGAATC AACACGAGGT ACTTCCATTG CACAGAAGAC ATCCTGAAGG CCAATCCGTC GATGTGCACG TACCTGGAGC CGTCGCTCGA CATCCGACAG GACATTGCGA TCAGGGAGGT GCCCAGATTG GCGGAGAAGG CGGCCATCGA GGCCCTGGCG GAATGGGGCC AACCCAGAGA CCAGATCACG CACGTCGTGT TCGCAACCAC GAGCGGCGTG AACATGCCCG GAGCTGACCT CACTCTAACC AGGCTCTTGG GTTTGAACCC GAACGTGAAC CGTACCATGC TCTACCAACA AGGCTGCTTC GGAGGCGCCA CGGTTCTGCG CGTGGCCAAG GACCTGGCGG AGAACAACAA GGGCGCCCGA GTTCTCACCG TCGTGAGCGA GCTCACATGT GTCACCTTCC GGGCGCCGAA CGAGGAGCAT CTGGACAATC TGGTGGGTTC AGCCATCTTC GGCGACGGAG CTTCAGTTCT AGTCATCGGA TCTGATCCTA TACCTGAAGT GGAGAAACCC CAGTTCGAGA TTCACTGGTC AGGGGAGACT ATTTTGCCAG AGAGCGATGG TGCTATCGAG GGGCGGCTGA CAGAAGCTGG ACTCATTTTC CATCTGTTGA AGGACGTTCC CGGCCTCATT TCCAGAAATA CCCTTCCCAT TTTCAACAAA GCAATTGAAG TGGCAGGATC CCCGAGCTGG AATGATCTGT TCTGGTGCGT GCACCCCGGA GGCCGTGCCA TTCTGGACGA GGTTGCCAAA ACCCTGAGCT TGAAGCCGGA GAAGCTCGAG GCCACGAGAG ACATCCTCTA CAACTACGGG AACATGTCCG GCGCCAGCGT GCTCTTCGTC TTGGACCAGA TGCGGAGGCG GTCGGCCGAC AAGAACTGCA CCACCACCGG CGAAGGGTGC GACTGGGGCC TCGTGGTCGG GTTCGGGCCG GGACTGACGG TCGAGGTCTC CGTTCTCAAA GCCATCGCCA CCGCTAACTA GAAAACCCCT CCTTCGTTCC CTACGCGAGA AATTTTCCAT TCGGCAAATA ATTCATCCGT CCGCAGTTAC GAAACCGCCT TGACTTTGCA CGGATCCAGT ACGCGGACTC GTGAGAGCTC CGTGAGAGCT CGAAGAGTCT AGAGGAGTAG CATCATGAAG TCCTCAGCGT TATCGTCGGT GGTCGCACAC GAGAGTCTTG CCGTCTTCTG AGAAAGTAGC GGTGCCAAGG CCTAAGCTAG TGTTAGATCA CGGCCCAAGA TATCGACGGT TCTCTCAAAA TCCTAGAATA ATTCGTTGTC TCGAAAGGAG GAGCTGATCG AGACGTGAAT CTTAGATTAG ATTGACTGTA CAAACATACA AAGTAAAGCT CCATAATTCT TCATTCA |
mRNA UTR + CDS |
| >Mp4g14450.1 TCTACTCTGG TACTCAGAAG TTTCGGTGTC TAGTACAGTC TGCTCTTAGA ATACAACTGC GAATTCCGAA AATTGGGATC TCAGTCTTCG GGGTGTATTG AATTGCATCG AAGGTTTTGT AGCAGAAGCT GAGAGCGTAG AGATGGCCAA CAATGCCAAT GCCAATGCTG CTACTGGTTA CAGACATCAG AGGGCTAATG GACCCGCGAC AGTCCTAGCC ATTGGCAAGG CTACTCCCCC CACAGCGTAC CCGCAAAGTG AATACCCGGA CTTCTTCTTC AACGTCACCA ACACCAATCA CAAGACTGAG CTCAAGGCCA AATTTGCTCG CATCTGCAAG AATTCCGGAA TCAACACGAG GTACTTCCAT TGCACAGAAG ACATCCTGAA GGCCAATCCG TCGATGTGCA CGTACCTGGA GCCGTCGCTC GACATCCGAC AGGACATTGC GATCAGGGAG GTGCCCAGAT TGGCGGAGAA GGCGGCCATC GAGGCCCTGG CGGAATGGGG CCAACCCAGA GACCAGATCA CGCACGTCGT GTTCGCAACC ACGAGCGGCG TGAACATGCC CGGAGCTGAC CTCACTCTAA CCAGGCTCTT GGGTTTGAAC CCGAACGTGA ACCGTACCAT GCTCTACCAA CAAGGCTGCT TCGGAGGCGC CACGGTTCTG CGCGTGGCCA AGGACCTGGC GGAGAACAAC AAGGGCGCCC GAGTTCTCAC CGTCGTGAGC GAGCTCACAT GTGTCACCTT CCGGGCGCCG AACGAGGAGC ATCTGGACAA TCTGGTGGGT TCAGCCATCT TCGGCGACGG AGCTTCAGTT CTAGTCATCG GATCTGATCC TATACCTGAA GTGGAGAAAC CCCAGTTCGA GATTCACTGG TCAGGGGAGA CTATTTTGCC AGAGAGCGAT GGTGCTATCG AGGGGCGGCT GACAGAAGCT GGACTCATTT TCCATCTGTT GAAGGACGTT CCCGGCCTCA TTTCCAGAAA TACCCTTCCC ATTTTCAACA AAGCAATTGA AGTGGCAGGA TCCCCGAGCT GGAATGATCT GTTCTGGTGC GTGCACCCCG GAGGCCGTGC CATTCTGGAC GAGGTTGCCA AAACCCTGAG CTTGAAGCCG GAGAAGCTCG AGGCCACGAG AGACATCCTC TACAACTACG GGAACATGTC CGGCGCCAGC GTGCTCTTCG TCTTGGACCA GATGCGGAGG CGGTCGGCCG ACAAGAACTG CACCACCACC GGCGAAGGGT GCGACTGGGG CCTCGTGGTC GGGTTCGGGC CGGGACTGAC GGTCGAGGTC TCCGTTCTCA AAGCCATCGC CACCGCTAAC TAGAAAACCC CTCCTTCGTT CCCTACGCGA GAAATTTTCC ATTCGGCAAA TAATTCATCC GTCCGCAGTT ACGAAACCGC CTTGACTTTG CACGGATCCA GTACGCGGAC TCGTGAGAGC TCCGTGAGAG CTCGAAGAGT CTAGAGGAGT AGCATCATGA AGTCCTCAGC GTTATCGTCG GTGGTCGCAC ACGAGAGTCT TGCCGTCTTC TGAGAAAGTA GCGGTGCCAA GGCCTAAGCT AGTGTTAGAT CACGGCCCAA GATATCGACG GTTCTCTCAA AATCCTAGAA TAATTCGTTG TCTCGAAAGG AGGAGCTGAT CGAGACGTGA ATCTTAGATT AGATTGACTG TACAAACATA CAAAGTAAAG CTCCATAATT CTTCATTCA |
CDS |
| >Mp4g14450.1 ATGGCCAACA ATGCCAATGC CAATGCTGCT ACTGGTTACA GACATCAGAG GGCTAATGGA CCCGCGACAG TCCTAGCCAT TGGCAAGGCT ACTCCCCCCA CAGCGTACCC GCAAAGTGAA TACCCGGACT TCTTCTTCAA CGTCACCAAC ACCAATCACA AGACTGAGCT CAAGGCCAAA TTTGCTCGCA TCTGCAAGAA TTCCGGAATC AACACGAGGT ACTTCCATTG CACAGAAGAC ATCCTGAAGG CCAATCCGTC GATGTGCACG TACCTGGAGC CGTCGCTCGA CATCCGACAG GACATTGCGA TCAGGGAGGT GCCCAGATTG GCGGAGAAGG CGGCCATCGA GGCCCTGGCG GAATGGGGCC AACCCAGAGA CCAGATCACG CACGTCGTGT TCGCAACCAC GAGCGGCGTG AACATGCCCG GAGCTGACCT CACTCTAACC AGGCTCTTGG GTTTGAACCC GAACGTGAAC CGTACCATGC TCTACCAACA AGGCTGCTTC GGAGGCGCCA CGGTTCTGCG CGTGGCCAAG GACCTGGCGG AGAACAACAA GGGCGCCCGA GTTCTCACCG TCGTGAGCGA GCTCACATGT GTCACCTTCC GGGCGCCGAA CGAGGAGCAT CTGGACAATC TGGTGGGTTC AGCCATCTTC GGCGACGGAG CTTCAGTTCT AGTCATCGGA TCTGATCCTA TACCTGAAGT GGAGAAACCC CAGTTCGAGA TTCACTGGTC AGGGGAGACT ATTTTGCCAG AGAGCGATGG TGCTATCGAG GGGCGGCTGA CAGAAGCTGG ACTCATTTTC CATCTGTTGA AGGACGTTCC CGGCCTCATT TCCAGAAATA CCCTTCCCAT TTTCAACAAA GCAATTGAAG TGGCAGGATC CCCGAGCTGG AATGATCTGT TCTGGTGCGT GCACCCCGGA GGCCGTGCCA TTCTGGACGA GGTTGCCAAA ACCCTGAGCT TGAAGCCGGA GAAGCTCGAG GCCACGAGAG ACATCCTCTA CAACTACGGG AACATGTCCG GCGCCAGCGT GCTCTTCGTC TTGGACCAGA TGCGGAGGCG GTCGGCCGAC AAGAACTGCA CCACCACCGG CGAAGGGTGC GACTGGGGCC TCGTGGTCGG GTTCGGGCCG GGACTGACGG TCGAGGTCTC CGTTCTCAAA GCCATCGCCA CCGCTAACTA G |
Protein |
| >Mp4g14450.1 MANNANANAA TGYRHQRANG PATVLAIGKA TPPTAYPQSE YPDFFFNVTN TNHKTELKAK FARICKNSGI NTRYFHCTED ILKANPSMCT YLEPSLDIRQ DIAIREVPRL AEKAAIEALA EWGQPRDQIT HVVFATTSGV NMPGADLTLT RLLGLNPNVN RTMLYQQGCF GGATVLRVAK DLAENNKGAR VLTVVSELTC VTFRAPNEEH LDNLVGSAIF GDGASVLVIG SDPIPEVEKP QFEIHWSGET ILPESDGAIE GRLTEAGLIF HLLKDVPGLI SRNTLPIFNK AIEVAGSPSW NDLFWCVHPG GRAILDEVAK TLSLKPEKLE ATRDILYNYG NMSGASVLFV LDQMRRRSAD KNCTTTGEGC DWGLVVGFGP GLTVEVSVLK AIATAN |