Mp4g16580



Description

Annotation

Database ID Description
PANTHER PTHR11101 PHOSPHATE TRANSPORTER
Pfam PF01384 Phosphate transporter family
KEGG K14640 solute carrier family 20 (sodium-dependent phosphate transporter)
KOG KOG2493 Na+/Pi symporter; [P]
MapolyID Mapoly0054s0125 -
GO GO:0035435 phosphate ion transmembrane transport
GO GO:0006817 phosphate ion transport
GO GO:0016020 membrane
GO GO:0005315 phosphate transmembrane transporter activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPTB2 phosphate Provisional

Associated Literature (AI-based literature mining, Beta-version)

phosphate (from nomenclature)

0 core 1 peripheral

Bonnot, C., et al. (2017) · New Phytologist  research experimental background
MpPTB2 phosphate transporter

Transcript models

Transcript ID Location Sequences Extract region
Mp4g16580.1 chr4:22172029..22175542 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g16580 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g16580 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.